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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:41.5 nTPM
HPA:41.5 nTPM
GTEx:33.4 nTPM
FANTOM5:77.4 Scaled Tags Per Million
Pig:17.6 nTPM
Mouse:21.3 nTPM
Allen mouse:4.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.5
Sample id Sample description nTPM
Hippocampus
nTPM: 39.9
1911 Female, age 85, right hemisphere 41.3
2148 Female, age 91, left hemisphere 41.2
1898 Male, age 80, left hemisphere 40.5
2621 Female, age 67, right hemisphere 39.5
2529 Female, age 94, left hemisphere 39.3
1855 Male, age 76, left hemisphere 37.9
Dentate gyrus
nTPM: 41.1
2531 Female, age 67, both hemispheres 43.4
1927 Female, age 91, both hemispheres 41.0
2246 Female, age 85, both hemispheres 40.7
2528 Male, age 74, both hemispheres 40.7
2530 Female, age 94, left hemisphere 40.6
2010 Male, age 76, both hemispheres 39.8
Entorhinal gyrus
nTPM: 41.1
2764 Male, age 80, right hemisphere 41.6
2686 Male, age 75, right hemisphere 41.4
1787 Male, age 76, left hemisphere 41.1
2613 Female, age 94, left hemisphere 41.0
2117 Female, age 91, right hemisphere 40.9
1938 Female, age 85, left hemisphere 40.3
Hippocampus, CA1
nTPM: 41.0
2749 Male, age 80, left hemisphere 43.3
2082 Female, age 91, right hemisphere 42.1
2045 Male, age 76, both hemispheres 40.4
1873 Female, age 85, both hemispheres 39.8
2527 Male, age 74, both hemispheres 39.4
Hippocampus, CA2
nTPM: 40.0
2113 Female, age 91, right hemisphere 40.8
2249 Male, age 74, both hemispheres 40.4
2437 Female, age 94, left hemisphere 40.4
1940 Female, age 85, left hemisphere 40.0
1963 Male, age 80, left hemisphere 39.4
1892 Male, age 76, both hemispheres 39.3
Hippocampus, CA3
nTPM: 41.3
2620 Female, age 94, left hemisphere 45.3
2137 Male, age 80, left hemisphere 43.4
2861 Female, age 67, both hemispheres 41.3
1891 Female, age 85, both hemispheres 40.6
1867 Male, age 76, both hemispheres 38.9
2436 Male, age 74, both hemispheres 38.5
Parahippocampal cortex
nTPM: 40.3
1990 Female, age 91, right hemisphere 41.7
2622 Female, age 67, right hemisphere 40.9
2250 Female, age 67, right hemisphere 40.5
2532 Female, age 72, left hemisphere 40.5
1933 Female, age 85, both hemispheres 40.4
1850 Male, age 80, both hemispheres 40.2
2018 Male, age 76, both hemispheres 40.1
2245 Female, age 91, both hemispheres 40.1
2692 Male, age 74, both hemispheres 39.3
2693 Female, age 94, both hemispheres 39.3
Perirhinal gyrus
nTPM: 41.5
1841 Female, age 85, right hemisphere 42.9
1794 Male, age 80, right hemisphere 42.7
2848 Male, age 76, right hemisphere 41.5
1847 Female, age 91, left hemisphere 40.9
2521 Female, age 94, right hemisphere 39.4
Subiculum
nTPM: 39.7
2619 Male, age 74, both hemispheres 40.8
1977 Female, age 85, both hemispheres 40.7
2729 Female, age 91, right hemisphere 40.5
1901 Male, age 80, both hemispheres 40.2
2042 Male, age 76, both hemispheres 39.1
2438 Female, age 94, left hemisphere 37.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.4
Samples: 197

Max nTPM: 50.9
Min nTPM: 20.3
Std nTPM: 5.7
Median nTPM: 32.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 50.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 50.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 50.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 46.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 46.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 46.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 46.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 45.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 45.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 44.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 44.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 77.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 77.4
FF:10169-103B7 60 years, female 86.8
FF:10153-102I9 76 years, female 68.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.6
Samples: 4

Max nTPM: 22.4
Min nTPM: 14.7
Sample A Female 22.4
Sample B Female 16.2
Sample C Male 16.9
Sample D Male 14.7
Entorhinal cortex
nTPM: 13.9
Samples: 4

Max nTPM: 15.5
Min nTPM: 11.3
Sample A Female 15.5
Sample B Female 15.3
Sample C Male 13.4
Sample D Male 11.3
Subiculum
nTPM: 13.9
Samples: 4

Max nTPM: 17.8
Min nTPM: 11.2
Sample A Female 17.8
Sample B Female 11.2
Sample C Male 13.8
Sample D Male 12.6
Ventral hippocampus
nTPM: 16.2
Samples: 4

Max nTPM: 19.4
Min nTPM: 11.2
Sample A Female 14.9
Sample B Female 11.2
Sample C Male 19.4
Sample D Male 19.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.4
Samples: 4

Max nTPM: 19.1
Min nTPM: 17.1
Sample A Male 18.6
Sample B Male 18.9
Sample C Female 19.1
Sample D Female 17.1
Hippocampal formation
nTPM: 21.3
Samples: 4

Max nTPM: 22.3
Min nTPM: 20.1
Sample A Male 21.9
Sample B Male 22.3
Sample C Female 20.1
Sample D Female 20.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.1
2418 Antisense, RP_Baylor_253940, Mouse strain C57BL/6J (56 days, male) 4.1
2417 Antisense, RP_Baylor_253940, Mouse strain C57BL/6J (56 days, male) 0.8

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The Human Protein Atlas

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