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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		98.295
RNA expressioni
Consensus:44.1 nTPM
HPA:44.1 nTPM
GTEx:37.8 nTPM
FANTOM5:70.2 Scaled Tags Per Million
Pig:47.8 nTPM
Mouse:78.6 nTPM
Allen mouse:14.1 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA017960
Amygdala mean intensity 98.295
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 70.317
Basal medial amygdaloid nucleus 80.020
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 51.359
Cortical amygdala 98.295
Central amygdala 89.463
Medial amygdaloid nucleus 90.332

AMYGDALA - HPA Brain RNA-seq
Max nTPM 44.1
Sample id Sample description nTPM
Amygdala
nTPM: 44.1
2814 Male, age 76, right hemisphere 62.9
2695 Female, age 67, right hemisphere 47.9
1987 Female, age 91, left hemisphere 37.0
2514 Male, age 75, right hemisphere 36.5
2517 Female, age 94, left hemisphere 36.3
Basal amygdala
nTPM: 40.7
1955 Male, age 76, both hemispheres 51.0
2110 Male, age 80, left hemisphere 44.5
2685 Female, age 94, left hemisphere 41.7
2243 Female, age 91, right hemisphere 38.9
2827 Female, age 67, right hemisphere 35.0
2609 Male, age 75, right hemisphere 33.2
Central amygdala
nTPM: 41.1
1905 Male, age 76, both hemispheres 59.3
2239 Male, age 80, left hemisphere 40.1
2826 Female, age 94, left hemisphere 38.3
2701 Female, age 91, right hemisphere 35.2
2515 Male, age 75, right hemisphere 32.5
Corticomedial amygdala
nTPM: 36.9
2240 Male, age 76, both hemispheres 44.4
2829 Male, age 80, left hemisphere 40.8
2429 Female, age 94, left hemisphere 38.1
2242 Female, age 91, right hemisphere 34.7
2535 Female, age 67, right hemisphere 32.9
2428 Male, age 75, right hemisphere 30.6
Lateral amygdala
nTPM: 41.2
1883 Male, age 76, both hemispheres 55.3
2534 Female, age 94, left hemisphere 45.7
2256 Male, age 80, left hemisphere 44.7
2255 Female, age 91, right hemisphere 36.2
2830 Female, age 67, right hemisphere 33.3
2516 Male, age 75, right hemisphere 32.0
Stria terminalis, bed nucleus
nTPM: 42.7
2486 Female, age 94, both hemispheres 49.6
1974 Female, age 91, both hemispheres 43.3
2201 Male, age 74, unknown 35.2

AMYGDALA - GTEx RNA-seqi
Average nTPM 37.8
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 37.8
Samples: 152

Max nTPM: 64.1
Min nTPM: 5.6
Std nTPM: 9.3
Median nTPM: 37.6
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 64.1
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 63.9
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 62.3
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 60.4
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 59.2
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 58.1
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 56.3
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 55.4
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 54.7
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 53.7
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 53.7
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 70.2
FF:10151-102I7 76 years, female 70.2

AMYGDALA - Pig RNA-seqi
Average nTPM 47.8
Pig sample Sample description nTPM
Amygdala
nTPM: 47.8
Samples: 4

Max nTPM: 62.6
Min nTPM: 39.5
Sample A Female 62.6
Sample B Female 39.5
Sample C Male 46.6
Sample D Male 42.6

AMYGDALA - Mouse RNA-seqi
Average nTPM 78.6
Mouse sample Sample description nTPM
Amygdala
nTPM: 78.7
Samples: 4

Max nTPM: 89.1
Min nTPM: 71.8
Sample A Male 76.4
Sample B Male 77.3
Sample C Female 89.1
Sample D Female 71.8

AMYGDALA - Allen Mouse ISHi
Max Expression energy 14.1
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 14.1
68845275 Antisense, RP_050224_01_E01, Mouse strain C57BL/6J (56 days, male) 15.2
72077454 Antisense, RP_051017_03_A08, Mouse strain C57BL/6J (56 days, male) 13.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.