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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:15.6 nTPM
HPA:15.6 nTPM
GTEx:11.9 nTPM
FANTOM5:33.7 Scaled Tags Per Million
Pig:5.3 nTPM
Mouse:18.7 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023383
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.6
Sample id Sample description nTPM
Hippocampus
nTPM: 11.4
1898 Male, age 80, left hemisphere 13.4
2621 Female, age 67, right hemisphere 12.7
1911 Female, age 85, right hemisphere 11.0
2529 Female, age 94, left hemisphere 10.9
1855 Male, age 76, left hemisphere 10.3
2148 Female, age 91, left hemisphere 10.3
Dentate gyrus
nTPM: 12.6
2528 Male, age 74, both hemispheres 13.1
2531 Female, age 67, both hemispheres 12.8
1927 Female, age 91, both hemispheres 12.6
2010 Male, age 76, both hemispheres 12.6
2530 Female, age 94, left hemisphere 12.5
2246 Female, age 85, both hemispheres 11.8
Entorhinal gyrus
nTPM: 13.5
2613 Female, age 94, left hemisphere 14.1
1938 Female, age 85, left hemisphere 14.0
2764 Male, age 80, right hemisphere 13.9
1787 Male, age 76, left hemisphere 13.3
2686 Male, age 75, right hemisphere 13.0
2117 Female, age 91, right hemisphere 12.7
Hippocampus, CA1
nTPM: 13.0
2749 Male, age 80, left hemisphere 15.3
2527 Male, age 74, both hemispheres 12.8
1873 Female, age 85, both hemispheres 12.7
2045 Male, age 76, both hemispheres 12.2
2082 Female, age 91, right hemisphere 11.9
Hippocampus, CA2
nTPM: 12.7
1963 Male, age 80, left hemisphere 15.2
1892 Male, age 76, both hemispheres 14.3
2249 Male, age 74, both hemispheres 12.8
2113 Female, age 91, right hemisphere 11.4
2437 Female, age 94, left hemisphere 11.4
1940 Female, age 85, left hemisphere 11.1
Hippocampus, CA3
nTPM: 12.9
2137 Male, age 80, left hemisphere 15.5
2436 Male, age 74, both hemispheres 13.4
2620 Female, age 94, left hemisphere 13.1
1867 Male, age 76, both hemispheres 12.3
1891 Female, age 85, both hemispheres 12.1
2861 Female, age 67, both hemispheres 11.3
Parahippocampal cortex
nTPM: 13.8
1850 Male, age 80, both hemispheres 16.9
2532 Female, age 72, left hemisphere 15.7
2693 Female, age 94, both hemispheres 14.1
1990 Female, age 91, right hemisphere 13.8
2250 Female, age 67, right hemisphere 13.2
2018 Male, age 76, both hemispheres 13.1
2245 Female, age 91, both hemispheres 13.1
2622 Female, age 67, right hemisphere 13.0
1933 Female, age 85, both hemispheres 12.5
2692 Male, age 74, both hemispheres 12.5
Perirhinal gyrus
nTPM: 15.6
1841 Female, age 85, right hemisphere 16.3
1794 Male, age 80, right hemisphere 16.1
1847 Female, age 91, left hemisphere 15.5
2521 Female, age 94, right hemisphere 15.2
2848 Male, age 76, right hemisphere 15.2
Subiculum
nTPM: 12.1
1901 Male, age 80, both hemispheres 13.4
1977 Female, age 85, both hemispheres 13.3
2729 Female, age 91, right hemisphere 12.2
2042 Male, age 76, both hemispheres 11.6
2438 Female, age 94, left hemisphere 11.3
2619 Male, age 74, both hemispheres 11.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.9
Samples: 197

Max nTPM: 26.6
Min nTPM: 5.1
Std nTPM: 3.6
Median nTPM: 11.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 26.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 22.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 22.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 21.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 21.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 21.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 20.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 20.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 20.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 20.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 19.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.7
FF:10169-103B7 60 years, female 41.8
FF:10153-102I9 76 years, female 25.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.2
Samples: 4

Max nTPM: 5.4
Min nTPM: 5.0
Sample A Female 5.4
Sample B Female 5.0
Sample C Male 5.2
Sample D Male 5.1
Entorhinal cortex
nTPM: 4.8
Samples: 4

Max nTPM: 5.0
Min nTPM: 4.2
Sample A Female 4.2
Sample B Female 5.0
Sample C Male 5.0
Sample D Male 4.9
Subiculum
nTPM: 5.3
Samples: 4

Max nTPM: 5.7
Min nTPM: 4.8
Sample A Female 4.8
Sample B Female 5.2
Sample C Male 5.5
Sample D Male 5.7
Ventral hippocampus
nTPM: 4.9
Samples: 4

Max nTPM: 5.2
Min nTPM: 4.5
Sample A Female 5.0
Sample B Female 4.9
Sample C Male 4.5
Sample D Male 5.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.7
Samples: 4

Max nTPM: 21.6
Min nTPM: 14.7
Sample A Male 20.2
Sample B Male 21.6
Sample C Female 18.2
Sample D Female 14.7
Hippocampal formation
nTPM: 18.7
Samples: 4

Max nTPM: 22.8
Min nTPM: 17.1
Sample A Male 22.8
Sample B Male 17.7
Sample C Female 17.1
Sample D Female 17.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
70474905 Antisense, RP_050623_01_C12, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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