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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:20.1 nTPM
HPA:20.1 nTPM
GTEx:58.7 nTPM
FANTOM5:130.5 Scaled Tags Per Million
Pig:44.3 nTPM
Mouse:112.3 nTPM
Allen mouse:5.7 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 20.1
Sample id Sample description nTPM
Amygdala
nTPM: 20.1
2514 Male, age 75, right hemisphere 21.7
1987 Female, age 91, left hemisphere 20.3
2814 Male, age 76, right hemisphere 19.9
2695 Female, age 67, right hemisphere 19.4
2517 Female, age 94, left hemisphere 19.3
Basal amygdala
nTPM: 18.5
2609 Male, age 75, right hemisphere 19.4
1955 Male, age 76, both hemispheres 18.9
2110 Male, age 80, left hemisphere 18.9
2827 Female, age 67, right hemisphere 18.1
2685 Female, age 94, left hemisphere 18.0
2243 Female, age 91, right hemisphere 17.7
Central amygdala
nTPM: 19.1
1905 Male, age 76, both hemispheres 19.8
2515 Male, age 75, right hemisphere 19.7
2239 Male, age 80, left hemisphere 18.9
2826 Female, age 94, left hemisphere 18.6
2701 Female, age 91, right hemisphere 18.4
Corticomedial amygdala
nTPM: 18.3
2428 Male, age 75, right hemisphere 20.7
2829 Male, age 80, left hemisphere 18.6
2240 Male, age 76, both hemispheres 18.2
2242 Female, age 91, right hemisphere 17.9
2429 Female, age 94, left hemisphere 17.4
2535 Female, age 67, right hemisphere 17.3
Lateral amygdala
nTPM: 18.8
2516 Male, age 75, right hemisphere 21.0
2534 Female, age 94, left hemisphere 19.2
1883 Male, age 76, both hemispheres 19.1
2830 Female, age 67, right hemisphere 18.4
2256 Male, age 80, left hemisphere 17.6
2255 Female, age 91, right hemisphere 17.5
Stria terminalis, bed nucleus
nTPM: 17.3
1974 Female, age 91, both hemispheres 17.7
2201 Male, age 74, unknown 17.2
2486 Female, age 94, both hemispheres 17.1

AMYGDALA - GTEx RNA-seqi
Average nTPM 58.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 58.7
Samples: 152

Max nTPM: 131.6
Min nTPM: 30.6
Std nTPM: 15.3
Median nTPM: 56.2
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 131.6
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 106.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 103.4
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 102.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 94.9
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 94.7
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 92.2
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 91.5
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 90.9
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 90.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 89.2
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 130.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 130.5
FF:10151-102I7 76 years, female 130.5

AMYGDALA - Pig RNA-seqi
Average nTPM 44.3
Pig sample Sample description nTPM
Amygdala
nTPM: 44.3
Samples: 4

Max nTPM: 48.1
Min nTPM: 41.3
Sample A Female 43.1
Sample B Female 48.1
Sample C Male 44.6
Sample D Male 41.3

AMYGDALA - Mouse RNA-seqi
Average nTPM 112.3
Mouse sample Sample description nTPM
Amygdala
nTPM: 112.3
Samples: 4

Max nTPM: 121.6
Min nTPM: 103.4
Sample A Male 112.3
Sample B Male 121.6
Sample C Female 103.4
Sample D Female 111.8

AMYGDALA - Allen Mouse ISHi
Max Expression energy 5.7
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 5.7
81599618 Antisense, RP_071127_04_D06, Mouse strain C57BL/6J (56 days, male) 5.7
513494 Antisense, RP_040810_02_A04, Mouse strain C57BL/6J (56 days, male) 5.7

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.