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DCTN6
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:50.4 nTPM
HPA:50.4 nTPM
GTEx:57.5 nTPM
FANTOM5:141.0 Scaled Tags Per Million
Pig:39.9 nTPM
Mouse:77.0 nTPM
Allen mouse:4.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024049Antibody HPA024558
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 50.4
Sample id Sample description nTPM
Hippocampus
nTPM: 48.8
1898 Male, age 80, left hemisphere 52.6
1855 Male, age 76, left hemisphere 50.9
1911 Female, age 85, right hemisphere 49.8
2529 Female, age 94, left hemisphere 49.4
2621 Female, age 67, right hemisphere 47.0
2148 Female, age 91, left hemisphere 43.1
Dentate gyrus
nTPM: 47.5
1927 Female, age 91, both hemispheres 52.1
2010 Male, age 76, both hemispheres 49.7
2528 Male, age 74, both hemispheres 47.7
2246 Female, age 85, both hemispheres 47.5
2530 Female, age 94, left hemisphere 46.7
2531 Female, age 67, both hemispheres 41.5
Entorhinal gyrus
nTPM: 45.6
1938 Female, age 85, left hemisphere 50.3
2117 Female, age 91, right hemisphere 46.9
1787 Male, age 76, left hemisphere 46.4
2764 Male, age 80, right hemisphere 45.5
2613 Female, age 94, left hemisphere 43.0
2686 Male, age 75, right hemisphere 41.7
Hippocampus, CA1
nTPM: 50.2
2749 Male, age 80, left hemisphere 57.2
2527 Male, age 74, both hemispheres 52.7
1873 Female, age 85, both hemispheres 51.2
2045 Male, age 76, both hemispheres 46.1
2082 Female, age 91, right hemisphere 44.0
Hippocampus, CA2
nTPM: 49.6
1892 Male, age 76, both hemispheres 54.9
1963 Male, age 80, left hemisphere 52.9
2249 Male, age 74, both hemispheres 51.0
2437 Female, age 94, left hemisphere 47.1
2113 Female, age 91, right hemisphere 46.0
1940 Female, age 85, left hemisphere 45.9
Hippocampus, CA3
nTPM: 48.8
2137 Male, age 80, left hemisphere 56.8
1891 Female, age 85, both hemispheres 50.9
1867 Male, age 76, both hemispheres 50.2
2436 Male, age 74, both hemispheres 49.5
2620 Female, age 94, left hemisphere 44.3
2861 Female, age 67, both hemispheres 41.2
Parahippocampal cortex
nTPM: 48.0
1850 Male, age 80, both hemispheres 52.2
2250 Female, age 67, right hemisphere 50.3
1933 Female, age 85, both hemispheres 49.6
2018 Male, age 76, both hemispheres 48.8
1990 Female, age 91, right hemisphere 48.5
2693 Female, age 94, both hemispheres 48.4
2245 Female, age 91, both hemispheres 47.5
2532 Female, age 72, left hemisphere 47.4
2692 Male, age 74, both hemispheres 45.2
2622 Female, age 67, right hemisphere 41.7
Perirhinal gyrus
nTPM: 50.4
1841 Female, age 85, right hemisphere 53.2
1794 Male, age 80, right hemisphere 51.3
1847 Female, age 91, left hemisphere 50.9
2848 Male, age 76, right hemisphere 49.0
2521 Female, age 94, right hemisphere 47.7
Subiculum
nTPM: 48.5
1901 Male, age 80, both hemispheres 51.8
2438 Female, age 94, left hemisphere 51.5
2042 Male, age 76, both hemispheres 47.7
1977 Female, age 85, both hemispheres 47.6
2619 Male, age 74, both hemispheres 46.3
2729 Female, age 91, right hemisphere 45.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 57.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.5
Samples: 197

Max nTPM: 153.4
Min nTPM: 34.2
Std nTPM: 13.1
Median nTPM: 56.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 153.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 104.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 101.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 99.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 83.0
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 79.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 79.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 77.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 76.4
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 75.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 75.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 141.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 141.0
FF:10169-103B7 60 years, female 160.0
FF:10153-102I9 76 years, female 121.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 39.7
Samples: 4

Max nTPM: 56.0
Min nTPM: 30.0
Sample A Female 56.0
Sample B Female 39.1
Sample C Male 33.5
Sample D Male 30.0
Entorhinal cortex
nTPM: 39.9
Samples: 4

Max nTPM: 51.7
Min nTPM: 29.6
Sample A Female 40.3
Sample B Female 51.7
Sample C Male 38.1
Sample D Male 29.6
Subiculum
nTPM: 36.9
Samples: 4

Max nTPM: 48.8
Min nTPM: 31.1
Sample A Female 48.8
Sample B Female 34.2
Sample C Male 31.1
Sample D Male 33.6
Ventral hippocampus
nTPM: 35.0
Samples: 4

Max nTPM: 42.3
Min nTPM: 30.4
Sample A Female 42.3
Sample B Female 30.4
Sample C Male 35.1
Sample D Male 32.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 77.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 70.1
Samples: 4

Max nTPM: 78.2
Min nTPM: 66.6
Sample A Male 68.6
Sample B Male 78.2
Sample C Female 66.6
Sample D Female 66.8
Hippocampal formation
nTPM: 77.0
Samples: 4

Max nTPM: 85.9
Min nTPM: 68.2
Sample A Male 85.9
Sample B Male 73.3
Sample C Female 68.2
Sample D Female 80.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.2
323597 Antisense, RP_040609_01_H01, Mouse strain C57BL/6J (56 days, male) 6.1
68203507 Antisense, RP_041208_01_E03, Mouse strain C57BL/6J (56 days, male) 2.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.