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R3HCC1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:39.9 nTPM
HPA:39.9 nTPM
GTEx:34.6 nTPM
FANTOM5:19.7 Scaled Tags Per Million
Pig:7.5 nTPM
Mouse:20.1 nTPM
Allen mouse:3.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023073Antibody HPA023153
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.9
Sample id Sample description nTPM
Hippocampus
nTPM: 38.3
1898 Male, age 80, left hemisphere 40.3
1911 Female, age 85, right hemisphere 39.1
1855 Male, age 76, left hemisphere 38.6
2529 Female, age 94, left hemisphere 38.0
2621 Female, age 67, right hemisphere 37.8
2148 Female, age 91, left hemisphere 35.8
Dentate gyrus
nTPM: 38.3
2530 Female, age 94, left hemisphere 40.7
2010 Male, age 76, both hemispheres 39.4
2246 Female, age 85, both hemispheres 38.7
2528 Male, age 74, both hemispheres 38.4
2531 Female, age 67, both hemispheres 36.8
1927 Female, age 91, both hemispheres 35.5
Entorhinal gyrus
nTPM: 39.7
2764 Male, age 80, right hemisphere 41.9
1938 Female, age 85, left hemisphere 40.4
2686 Male, age 75, right hemisphere 40.4
2613 Female, age 94, left hemisphere 39.2
1787 Male, age 76, left hemisphere 38.4
2117 Female, age 91, right hemisphere 37.7
Hippocampus, CA1
nTPM: 38.3
1873 Female, age 85, both hemispheres 40.3
2749 Male, age 80, left hemisphere 40.2
2527 Male, age 74, both hemispheres 37.8
2082 Female, age 91, right hemisphere 37.4
2045 Male, age 76, both hemispheres 35.8
Hippocampus, CA2
nTPM: 38.6
1963 Male, age 80, left hemisphere 41.4
2437 Female, age 94, left hemisphere 40.3
1892 Male, age 76, both hemispheres 39.1
1940 Female, age 85, left hemisphere 37.7
2249 Male, age 74, both hemispheres 37.6
2113 Female, age 91, right hemisphere 35.5
Hippocampus, CA3
nTPM: 38.0
1867 Male, age 76, both hemispheres 40.1
1891 Female, age 85, both hemispheres 39.6
2620 Female, age 94, left hemisphere 37.9
2861 Female, age 67, both hemispheres 37.8
2436 Male, age 74, both hemispheres 36.3
2137 Male, age 80, left hemisphere 36.2
Parahippocampal cortex
nTPM: 38.3
2532 Female, age 72, left hemisphere 42.6
1933 Female, age 85, both hemispheres 40.1
2018 Male, age 76, both hemispheres 39.3
2692 Male, age 74, both hemispheres 38.9
2622 Female, age 67, right hemisphere 37.8
1850 Male, age 80, both hemispheres 37.7
1990 Female, age 91, right hemisphere 37.2
2693 Female, age 94, both hemispheres 37.1
2250 Female, age 67, right hemisphere 36.6
2245 Female, age 91, both hemispheres 36.0
Perirhinal gyrus
nTPM: 36.9
1841 Female, age 85, right hemisphere 37.6
2848 Male, age 76, right hemisphere 37.2
1794 Male, age 80, right hemisphere 37.1
1847 Female, age 91, left hemisphere 36.9
2521 Female, age 94, right hemisphere 35.7
Subiculum
nTPM: 39.9
2438 Female, age 94, left hemisphere 42.9
1901 Male, age 80, both hemispheres 41.5
1977 Female, age 85, both hemispheres 41.2
2042 Male, age 76, both hemispheres 40.7
2619 Male, age 74, both hemispheres 38.4
2729 Female, age 91, right hemisphere 34.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.6
Samples: 197

Max nTPM: 62.0
Min nTPM: 17.0
Std nTPM: 8.0
Median nTPM: 33.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 62.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 61.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 60.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 55.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 53.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 52.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 51.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 50.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 50.3
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 49.7
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 49.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.7
FF:10153-102I9 76 years, female 20.6
FF:10169-103B7 60 years, female 18.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.2
Samples: 4

Max nTPM: 11.1
Min nTPM: 5.3
Sample A Female 11.1
Sample B Female 6.9
Sample C Male 5.3
Sample D Male 5.5
Entorhinal cortex
nTPM: 6.8
Samples: 4

Max nTPM: 9.5
Min nTPM: 5.0
Sample A Female 9.5
Sample B Female 6.2
Sample C Male 6.5
Sample D Male 5.0
Subiculum
nTPM: 7.0
Samples: 4

Max nTPM: 10.8
Min nTPM: 4.5
Sample A Female 10.8
Sample B Female 6.6
Sample C Male 5.9
Sample D Male 4.5
Ventral hippocampus
nTPM: 7.5
Samples: 4

Max nTPM: 10.5
Min nTPM: 5.5
Sample A Female 10.5
Sample B Female 5.5
Sample C Male 7.8
Sample D Male 6.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.1
Samples: 4

Max nTPM: 20.7
Min nTPM: 19.4
Sample A Male 20.0
Sample B Male 20.7
Sample C Female 19.4
Sample D Female 20.1
Hippocampal formation
nTPM: 18.5
Samples: 4

Max nTPM: 19.9
Min nTPM: 17.1
Sample A Male 18.5
Sample B Male 17.1
Sample C Female 19.9
Sample D Female 18.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.7
69353614 Antisense, RP_050412_02_D03, Mouse strain C57BL/6J (56 days, male) 3.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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