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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:17.1 nTPM
HPA:17.1 nTPM
GTEx:18.4 nTPM
FANTOM5:54.1 Scaled Tags Per Million
Pig:66.8 nTPM
Mouse:158.4 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049851Antibody HPA049974
Glial cells Not detectedNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.1
Sample id Sample description nTPM
Hippocampus
nTPM: 8.7
1898 Male, age 80, left hemisphere 13.5
2148 Female, age 91, left hemisphere 10.3
1855 Male, age 76, left hemisphere 8.6
2621 Female, age 67, right hemisphere 7.9
1911 Female, age 85, right hemisphere 6.6
2529 Female, age 94, left hemisphere 5.3
Dentate gyrus
nTPM: 11.8
1927 Female, age 91, both hemispheres 16.5
2528 Male, age 74, both hemispheres 12.1
2531 Female, age 67, both hemispheres 12.0
2010 Male, age 76, both hemispheres 11.0
2246 Female, age 85, both hemispheres 9.7
2530 Female, age 94, left hemisphere 9.1
Entorhinal gyrus
nTPM: 12.8
2764 Male, age 80, right hemisphere 16.9
1938 Female, age 85, left hemisphere 15.8
2613 Female, age 94, left hemisphere 13.7
1787 Male, age 76, left hemisphere 13.4
2686 Male, age 75, right hemisphere 10.2
2117 Female, age 91, right hemisphere 6.6
Hippocampus, CA1
nTPM: 11.4
2749 Male, age 80, left hemisphere 17.3
2045 Male, age 76, both hemispheres 12.6
2527 Male, age 74, both hemispheres 9.8
1873 Female, age 85, both hemispheres 9.7
2082 Female, age 91, right hemisphere 7.3
Hippocampus, CA2
nTPM: 10.0
1892 Male, age 76, both hemispheres 17.0
2249 Male, age 74, both hemispheres 15.1
1963 Male, age 80, left hemisphere 9.6
1940 Female, age 85, left hemisphere 6.5
2437 Female, age 94, left hemisphere 6.2
2113 Female, age 91, right hemisphere 5.9
Hippocampus, CA3
nTPM: 15.2
2436 Male, age 74, both hemispheres 22.3
2620 Female, age 94, left hemisphere 19.3
2137 Male, age 80, left hemisphere 15.7
1867 Male, age 76, both hemispheres 13.8
2861 Female, age 67, both hemispheres 11.0
1891 Female, age 85, both hemispheres 9.2
Parahippocampal cortex
nTPM: 11.5
1990 Female, age 91, right hemisphere 19.4
1850 Male, age 80, both hemispheres 17.8
2250 Female, age 67, right hemisphere 13.8
1933 Female, age 85, both hemispheres 12.2
2245 Female, age 91, both hemispheres 10.1
2693 Female, age 94, both hemispheres 10.1
2532 Female, age 72, left hemisphere 9.5
2622 Female, age 67, right hemisphere 8.9
2018 Male, age 76, both hemispheres 8.4
2692 Male, age 74, both hemispheres 4.5
Perirhinal gyrus
nTPM: 17.1
1847 Female, age 91, left hemisphere 26.3
1794 Male, age 80, right hemisphere 17.8
1841 Female, age 85, right hemisphere 14.8
2521 Female, age 94, right hemisphere 13.5
2848 Male, age 76, right hemisphere 13.1
Subiculum
nTPM: 8.0
1977 Female, age 85, both hemispheres 14.5
1901 Male, age 80, both hemispheres 9.9
2619 Male, age 74, both hemispheres 8.1
2729 Female, age 91, right hemisphere 7.0
2438 Female, age 94, left hemisphere 4.4
2042 Male, age 76, both hemispheres 3.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.4
Samples: 197

Max nTPM: 50.2
Min nTPM: 2.2
Std nTPM: 10.3
Median nTPM: 17.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 50.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 49.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 49.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 46.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 45.2
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 39.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 39.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 38.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 38.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 37.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 37.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 54.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 54.1
FF:10169-103B7 60 years, female 72.1
FF:10153-102I9 76 years, female 36.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 66.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 66.8
Samples: 4

Max nTPM: 79.0
Min nTPM: 54.5
Sample A Female 79.0
Sample B Female 72.7
Sample C Male 54.5
Sample D Male 61.0
Entorhinal cortex
nTPM: 55.9
Samples: 4

Max nTPM: 63.8
Min nTPM: 43.0
Sample A Female 60.1
Sample B Female 63.8
Sample C Male 56.5
Sample D Male 43.0
Subiculum
nTPM: 59.7
Samples: 4

Max nTPM: 76.7
Min nTPM: 52.8
Sample A Female 76.7
Sample B Female 55.7
Sample C Male 52.8
Sample D Male 53.5
Ventral hippocampus
nTPM: 58.5
Samples: 4

Max nTPM: 68.0
Min nTPM: 47.7
Sample A Female 68.0
Sample B Female 47.7
Sample C Male 60.6
Sample D Male 57.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 158.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 158.4
Samples: 4

Max nTPM: 174.2
Min nTPM: 145.3
Sample A Male 145.3
Sample B Male 174.2
Sample C Female 153.0
Sample D Female 161.2
Hippocampal formation
nTPM: 137.6
Samples: 4

Max nTPM: 165.8
Min nTPM: 126.4
Sample A Male 165.8
Sample B Male 126.4
Sample C Female 128.7
Sample D Female 129.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.