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NUCB1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:58.2 nTPM
HPA:58.2 nTPM
GTEx:56.3 nTPM
FANTOM5:47.0 Scaled Tags Per Million
Pig:39.3 nTPM
Mouse:60.1 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008176
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 58.2
Sample id Sample description nTPM
Hippocampus
nTPM: 55.7
2529 Female, age 94, left hemisphere 66.2
2621 Female, age 67, right hemisphere 58.4
1898 Male, age 80, left hemisphere 56.4
1855 Male, age 76, left hemisphere 54.0
2148 Female, age 91, left hemisphere 53.7
1911 Female, age 85, right hemisphere 45.6
Dentate gyrus
nTPM: 52.1
2010 Male, age 76, both hemispheres 59.6
2530 Female, age 94, left hemisphere 55.7
2531 Female, age 67, both hemispheres 50.3
2246 Female, age 85, both hemispheres 49.1
2528 Male, age 74, both hemispheres 49.0
1927 Female, age 91, both hemispheres 48.9
Entorhinal gyrus
nTPM: 57.2
2764 Male, age 80, right hemisphere 61.2
1787 Male, age 76, left hemisphere 59.7
2117 Female, age 91, right hemisphere 59.0
1938 Female, age 85, left hemisphere 56.8
2686 Male, age 75, right hemisphere 54.3
2613 Female, age 94, left hemisphere 52.1
Hippocampus, CA1
nTPM: 54.1
2045 Male, age 76, both hemispheres 59.4
2749 Male, age 80, left hemisphere 55.6
2527 Male, age 74, both hemispheres 53.3
1873 Female, age 85, both hemispheres 52.1
2082 Female, age 91, right hemisphere 50.2
Hippocampus, CA2
nTPM: 54.2
1892 Male, age 76, both hemispheres 60.0
2437 Female, age 94, left hemisphere 59.7
2249 Male, age 74, both hemispheres 52.9
1963 Male, age 80, left hemisphere 51.2
1940 Female, age 85, left hemisphere 50.9
2113 Female, age 91, right hemisphere 50.2
Hippocampus, CA3
nTPM: 55.1
1867 Male, age 76, both hemispheres 60.4
2620 Female, age 94, left hemisphere 60.2
2436 Male, age 74, both hemispheres 58.4
2861 Female, age 67, both hemispheres 54.5
2137 Male, age 80, left hemisphere 50.8
1891 Female, age 85, both hemispheres 46.5
Parahippocampal cortex
nTPM: 56.4
2018 Male, age 76, both hemispheres 62.8
2532 Female, age 72, left hemisphere 60.5
2245 Female, age 91, both hemispheres 59.4
2622 Female, age 67, right hemisphere 59.0
1850 Male, age 80, both hemispheres 57.9
1990 Female, age 91, right hemisphere 56.0
1933 Female, age 85, both hemispheres 55.9
2250 Female, age 67, right hemisphere 53.2
2692 Male, age 74, both hemispheres 52.8
2693 Female, age 94, both hemispheres 46.4
Perirhinal gyrus
nTPM: 58.2
1794 Male, age 80, right hemisphere 62.3
1847 Female, age 91, left hemisphere 61.8
2848 Male, age 76, right hemisphere 60.1
1841 Female, age 85, right hemisphere 58.1
2521 Female, age 94, right hemisphere 49.0
Subiculum
nTPM: 55.6
2042 Male, age 76, both hemispheres 62.1
2438 Female, age 94, left hemisphere 61.2
2619 Male, age 74, both hemispheres 57.6
1901 Male, age 80, both hemispheres 53.0
1977 Female, age 85, both hemispheres 51.6
2729 Female, age 91, right hemisphere 48.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.3
Samples: 197

Max nTPM: 122.7
Min nTPM: 31.8
Std nTPM: 15.6
Median nTPM: 53.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 122.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 118.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 109.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 108.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 101.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 101.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 96.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 85.8
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 85.5
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 85.4
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 85.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.0
FF:10169-103B7 60 years, female 51.2
FF:10153-102I9 76 years, female 42.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 38.2
Samples: 4

Max nTPM: 47.3
Min nTPM: 25.1
Sample A Female 47.3
Sample B Female 38.3
Sample C Male 42.1
Sample D Male 25.1
Entorhinal cortex
nTPM: 35.4
Samples: 4

Max nTPM: 39.9
Min nTPM: 32.1
Sample A Female 39.9
Sample B Female 32.1
Sample C Male 37.0
Sample D Male 32.7
Subiculum
nTPM: 39.3
Samples: 4

Max nTPM: 47.1
Min nTPM: 31.1
Sample A Female 47.1
Sample B Female 31.1
Sample C Male 41.8
Sample D Male 37.2
Ventral hippocampus
nTPM: 38.7
Samples: 4

Max nTPM: 54.7
Min nTPM: 23.8
Sample A Female 37.4
Sample B Female 23.8
Sample C Male 54.7
Sample D Male 38.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 60.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.6
Samples: 4

Max nTPM: 62.8
Min nTPM: 56.6
Sample A Male 56.6
Sample B Male 61.9
Sample C Female 57.0
Sample D Female 62.8
Hippocampal formation
nTPM: 60.1
Samples: 4

Max nTPM: 75.1
Min nTPM: 48.9
Sample A Male 48.9
Sample B Male 59.7
Sample C Female 56.7
Sample D Female 75.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
69782467 Antisense, RP_050505_03_A10, Mouse strain C57BL/6J (56 days, male) 2.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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