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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:132.7 nTPM
HPA:132.7 nTPM
GTEx:310.4 nTPM
FANTOM5:487.1 Scaled Tags Per Million
Pig:260.9 nTPM
Mouse:524.4 nTPM
Allen mouse:15.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA009291
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 132.7
Sample id Sample description nTPM
Hippocampus
nTPM: 124.0
1898 Male, age 80, left hemisphere 151.5
1855 Male, age 76, left hemisphere 127.7
1911 Female, age 85, right hemisphere 121.3
2529 Female, age 94, left hemisphere 118.2
2621 Female, age 67, right hemisphere 116.3
2148 Female, age 91, left hemisphere 109.0
Dentate gyrus
nTPM: 125.9
2010 Male, age 76, both hemispheres 148.0
2530 Female, age 94, left hemisphere 147.4
1927 Female, age 91, both hemispheres 137.7
2246 Female, age 85, both hemispheres 113.9
2528 Male, age 74, both hemispheres 104.8
2531 Female, age 67, both hemispheres 103.5
Entorhinal gyrus
nTPM: 111.2
1938 Female, age 85, left hemisphere 128.0
1787 Male, age 76, left hemisphere 115.5
2117 Female, age 91, right hemisphere 109.0
2764 Male, age 80, right hemisphere 106.5
2686 Male, age 75, right hemisphere 104.6
2613 Female, age 94, left hemisphere 103.7
Hippocampus, CA1
nTPM: 132.7
2749 Male, age 80, left hemisphere 165.7
1873 Female, age 85, both hemispheres 142.8
2045 Male, age 76, both hemispheres 126.2
2527 Male, age 74, both hemispheres 115.6
2082 Female, age 91, right hemisphere 113.2
Hippocampus, CA2
nTPM: 129.6
1892 Male, age 76, both hemispheres 157.9
1963 Male, age 80, left hemisphere 145.1
2437 Female, age 94, left hemisphere 122.1
1940 Female, age 85, left hemisphere 120.4
2249 Male, age 74, both hemispheres 116.1
2113 Female, age 91, right hemisphere 115.7
Hippocampus, CA3
nTPM: 124.3
2137 Male, age 80, left hemisphere 153.0
1867 Male, age 76, both hemispheres 132.6
2436 Male, age 74, both hemispheres 123.4
1891 Female, age 85, both hemispheres 116.6
2620 Female, age 94, left hemisphere 113.0
2861 Female, age 67, both hemispheres 107.0
Parahippocampal cortex
nTPM: 116.2
1850 Male, age 80, both hemispheres 130.2
2245 Female, age 91, both hemispheres 124.1
1933 Female, age 85, both hemispheres 123.9
2250 Female, age 67, right hemisphere 122.5
2018 Male, age 76, both hemispheres 119.4
1990 Female, age 91, right hemisphere 118.8
2693 Female, age 94, both hemispheres 114.0
2532 Female, age 72, left hemisphere 108.6
2692 Male, age 74, both hemispheres 101.4
2622 Female, age 67, right hemisphere 98.6
Perirhinal gyrus
nTPM: 126.6
1841 Female, age 85, right hemisphere 138.1
1847 Female, age 91, left hemisphere 135.8
1794 Male, age 80, right hemisphere 125.0
2848 Male, age 76, right hemisphere 117.1
2521 Female, age 94, right hemisphere 117.0
Subiculum
nTPM: 114.1
1901 Male, age 80, both hemispheres 124.8
2042 Male, age 76, both hemispheres 117.2
1977 Female, age 85, both hemispheres 116.8
2438 Female, age 94, left hemisphere 113.3
2619 Male, age 74, both hemispheres 109.9
2729 Female, age 91, right hemisphere 102.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 310.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 310.4
Samples: 197

Max nTPM: 961.8
Min nTPM: 87.4
Std nTPM: 121.3
Median nTPM: 302.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 961.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 719.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 633.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 587.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 580.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 571.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 545.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 540.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 536.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 530.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 521.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 487.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 487.1
FF:10169-103B7 60 years, female 582.8
FF:10153-102I9 76 years, female 391.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 260.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 260.9
Samples: 4

Max nTPM: 356.4
Min nTPM: 203.7
Sample A Female 356.4
Sample B Female 266.1
Sample C Male 217.4
Sample D Male 203.7
Entorhinal cortex
nTPM: 252.4
Samples: 4

Max nTPM: 294.0
Min nTPM: 200.9
Sample A Female 246.3
Sample B Female 294.0
Sample C Male 268.2
Sample D Male 200.9
Subiculum
nTPM: 215.3
Samples: 4

Max nTPM: 312.0
Min nTPM: 174.0
Sample A Female 312.0
Sample B Female 200.3
Sample C Male 174.0
Sample D Male 175.0
Ventral hippocampus
nTPM: 231.6
Samples: 4

Max nTPM: 255.8
Min nTPM: 182.3
Sample A Female 235.8
Sample B Female 182.3
Sample C Male 252.5
Sample D Male 255.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 524.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 505.9
Samples: 4

Max nTPM: 526.2
Min nTPM: 473.7
Sample A Male 498.9
Sample B Male 526.2
Sample C Female 524.8
Sample D Female 473.7
Hippocampal formation
nTPM: 524.4
Samples: 4

Max nTPM: 564.6
Min nTPM: 478.5
Sample A Male 534.6
Sample B Male 478.5
Sample C Female 519.9
Sample D Female 564.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.6
69782533 Antisense, RP_050505_03_B12, Mouse strain C57BL/6J (56 days, male) 15.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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