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TRMT1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:15.5 nTPM
HPA:15.5 nTPM
GTEx:17.1 nTPM
FANTOM5:12.9 Scaled Tags Per Million
Pig:10.5 nTPM
Mouse:21.4 nTPM
Allen mouse:8.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041130Antibody HPA041380
Glial cells MediumNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.5
Sample id Sample description nTPM
Hippocampus
nTPM: 14.7
2148 Female, age 91, left hemisphere 15.9
1911 Female, age 85, right hemisphere 14.8
2529 Female, age 94, left hemisphere 14.7
2621 Female, age 67, right hemisphere 14.6
1898 Male, age 80, left hemisphere 14.1
1855 Male, age 76, left hemisphere 14.0
Dentate gyrus
nTPM: 15.5
2528 Male, age 74, both hemispheres 17.1
2531 Female, age 67, both hemispheres 16.4
1927 Female, age 91, both hemispheres 15.4
2246 Female, age 85, both hemispheres 14.8
2530 Female, age 94, left hemisphere 14.8
2010 Male, age 76, both hemispheres 14.4
Entorhinal gyrus
nTPM: 15.3
2613 Female, age 94, left hemisphere 17.3
2764 Male, age 80, right hemisphere 16.2
1787 Male, age 76, left hemisphere 14.7
1938 Female, age 85, left hemisphere 14.6
2686 Male, age 75, right hemisphere 14.6
2117 Female, age 91, right hemisphere 14.5
Hippocampus, CA1
nTPM: 15.2
2749 Male, age 80, left hemisphere 15.4
2045 Male, age 76, both hemispheres 15.3
2527 Male, age 74, both hemispheres 15.2
1873 Female, age 85, both hemispheres 15.1
2082 Female, age 91, right hemisphere 15.0
Hippocampus, CA2
nTPM: 15.0
1963 Male, age 80, left hemisphere 15.5
2249 Male, age 74, both hemispheres 15.5
1892 Male, age 76, both hemispheres 15.4
2113 Female, age 91, right hemisphere 14.7
2437 Female, age 94, left hemisphere 14.6
1940 Female, age 85, left hemisphere 14.3
Hippocampus, CA3
nTPM: 14.9
2620 Female, age 94, left hemisphere 16.3
1867 Male, age 76, both hemispheres 15.7
2137 Male, age 80, left hemisphere 15.3
2861 Female, age 67, both hemispheres 14.5
1891 Female, age 85, both hemispheres 14.3
2436 Male, age 74, both hemispheres 13.1
Parahippocampal cortex
nTPM: 15.0
2622 Female, age 67, right hemisphere 15.8
2250 Female, age 67, right hemisphere 15.4
2018 Male, age 76, both hemispheres 15.3
2245 Female, age 91, both hemispheres 15.3
1933 Female, age 85, both hemispheres 15.1
2532 Female, age 72, left hemisphere 15.1
1990 Female, age 91, right hemisphere 14.9
1850 Male, age 80, both hemispheres 14.6
2693 Female, age 94, both hemispheres 14.6
2692 Male, age 74, both hemispheres 13.8
Perirhinal gyrus
nTPM: 15.4
2521 Female, age 94, right hemisphere 16.3
1847 Female, age 91, left hemisphere 15.7
1794 Male, age 80, right hemisphere 15.3
1841 Female, age 85, right hemisphere 15.1
2848 Male, age 76, right hemisphere 14.8
Subiculum
nTPM: 14.7
2729 Female, age 91, right hemisphere 15.3
2619 Male, age 74, both hemispheres 15.1
1977 Female, age 85, both hemispheres 14.8
2042 Male, age 76, both hemispheres 14.8
2438 Female, age 94, left hemisphere 14.4
1901 Male, age 80, both hemispheres 14.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.1
Samples: 197

Max nTPM: 26.1
Min nTPM: 8.8
Std nTPM: 3.5
Median nTPM: 16.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 26.1
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 25.9
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 25.6
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 24.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 24.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 23.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 23.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 23.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 23.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 23.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 23.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.9
FF:10153-102I9 76 years, female 15.3
FF:10169-103B7 60 years, female 10.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.4
Samples: 4

Max nTPM: 12.4
Min nTPM: 8.8
Sample A Female 12.4
Sample B Female 10.5
Sample C Male 9.8
Sample D Male 8.8
Entorhinal cortex
nTPM: 9.4
Samples: 4

Max nTPM: 11.0
Min nTPM: 8.0
Sample A Female 11.0
Sample B Female 8.0
Sample C Male 9.2
Sample D Male 9.2
Subiculum
nTPM: 9.5
Samples: 4

Max nTPM: 11.8
Min nTPM: 8.4
Sample A Female 11.8
Sample B Female 8.8
Sample C Male 8.8
Sample D Male 8.4
Ventral hippocampus
nTPM: 10.5
Samples: 4

Max nTPM: 12.7
Min nTPM: 7.0
Sample A Female 10.0
Sample B Female 7.0
Sample C Male 12.7
Sample D Male 12.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.4
Samples: 4

Max nTPM: 26.4
Min nTPM: 17.9
Sample A Male 20.5
Sample B Male 26.4
Sample C Female 20.7
Sample D Female 17.9
Hippocampal formation
nTPM: 21.2
Samples: 4

Max nTPM: 24.6
Min nTPM: 17.5
Sample A Male 24.6
Sample B Male 21.8
Sample C Female 17.5
Sample D Female 20.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.1
68522314 Antisense, RP_050118_01_G10, Mouse strain C57BL/6J (56 days, male) 8.1

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The Human Protein Atlas

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