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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:17.3 nTPM
HPA:17.3 nTPM
GTEx:18.1 nTPM
FANTOM5:29.6 Scaled Tags Per Million
Pig:8.8 nTPM
Mouse:10.1 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056977
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.3
Sample id Sample description nTPM
Hippocampus
nTPM: 16.5
1911 Female, age 85, right hemisphere 18.8
2529 Female, age 94, left hemisphere 18.5
2621 Female, age 67, right hemisphere 16.3
2148 Female, age 91, left hemisphere 16.2
1898 Male, age 80, left hemisphere 14.5
1855 Male, age 76, left hemisphere 14.4
Dentate gyrus
nTPM: 17.2
2530 Female, age 94, left hemisphere 19.2
2531 Female, age 67, both hemispheres 18.3
2246 Female, age 85, both hemispheres 17.1
2528 Male, age 74, both hemispheres 16.7
2010 Male, age 76, both hemispheres 16.3
1927 Female, age 91, both hemispheres 15.4
Entorhinal gyrus
nTPM: 16.8
2686 Male, age 75, right hemisphere 18.9
2764 Male, age 80, right hemisphere 18.9
1787 Male, age 76, left hemisphere 17.0
2613 Female, age 94, left hemisphere 16.7
2117 Female, age 91, right hemisphere 15.9
1938 Female, age 85, left hemisphere 13.2
Hippocampus, CA1
nTPM: 16.2
2082 Female, age 91, right hemisphere 19.5
1873 Female, age 85, both hemispheres 16.6
2045 Male, age 76, both hemispheres 15.8
2527 Male, age 74, both hemispheres 15.6
2749 Male, age 80, left hemisphere 13.6
Hippocampus, CA2
nTPM: 16.3
1940 Female, age 85, left hemisphere 18.8
2249 Male, age 74, both hemispheres 17.3
2437 Female, age 94, left hemisphere 17.1
2113 Female, age 91, right hemisphere 16.6
1963 Male, age 80, left hemisphere 14.7
1892 Male, age 76, both hemispheres 13.3
Hippocampus, CA3
nTPM: 17.3
2436 Male, age 74, both hemispheres 19.1
2620 Female, age 94, left hemisphere 19.0
1891 Female, age 85, both hemispheres 18.4
2137 Male, age 80, left hemisphere 17.1
2861 Female, age 67, both hemispheres 15.3
1867 Male, age 76, both hemispheres 15.1
Parahippocampal cortex
nTPM: 16.6
2622 Female, age 67, right hemisphere 18.9
2692 Male, age 74, both hemispheres 18.9
2532 Female, age 72, left hemisphere 18.0
2693 Female, age 94, both hemispheres 17.4
1990 Female, age 91, right hemisphere 16.4
2018 Male, age 76, both hemispheres 16.2
1933 Female, age 85, both hemispheres 15.6
2250 Female, age 67, right hemisphere 15.3
2245 Female, age 91, both hemispheres 15.1
1850 Male, age 80, both hemispheres 14.6
Perirhinal gyrus
nTPM: 14.9
1794 Male, age 80, right hemisphere 15.9
2848 Male, age 76, right hemisphere 15.4
1841 Female, age 85, right hemisphere 14.6
1847 Female, age 91, left hemisphere 14.2
2521 Female, age 94, right hemisphere 14.2
Subiculum
nTPM: 17.0
2619 Male, age 74, both hemispheres 20.3
2042 Male, age 76, both hemispheres 18.0
1901 Male, age 80, both hemispheres 17.0
2729 Female, age 91, right hemisphere 16.8
1977 Female, age 85, both hemispheres 15.4
2438 Female, age 94, left hemisphere 14.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.1
Samples: 197

Max nTPM: 34.1
Min nTPM: 7.9
Std nTPM: 4.6
Median nTPM: 17.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 34.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 31.4
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 31.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 30.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 29.7
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 28.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 28.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 27.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 27.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 27.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 27.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.6
FF:10153-102I9 76 years, female 32.1
FF:10169-103B7 60 years, female 27.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.3
Samples: 4

Max nTPM: 11.2
Min nTPM: 5.8
Sample A Female 11.2
Sample B Female 7.3
Sample C Male 9.0
Sample D Male 5.8
Entorhinal cortex
nTPM: 8.0
Samples: 4

Max nTPM: 9.4
Min nTPM: 7.0
Sample A Female 9.4
Sample B Female 7.8
Sample C Male 7.7
Sample D Male 7.0
Subiculum
nTPM: 8.4
Samples: 4

Max nTPM: 11.1
Min nTPM: 7.1
Sample A Female 11.1
Sample B Female 7.1
Sample C Male 7.8
Sample D Male 7.7
Ventral hippocampus
nTPM: 8.8
Samples: 4

Max nTPM: 10.6
Min nTPM: 6.7
Sample A Female 9.8
Sample B Female 6.7
Sample C Male 10.6
Sample D Male 8.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.6
Samples: 4

Max nTPM: 10.3
Min nTPM: 5.0
Sample A Male 7.1
Sample B Male 8.1
Sample C Female 10.3
Sample D Female 5.0
Hippocampal formation
nTPM: 10.1
Samples: 4

Max nTPM: 11.9
Min nTPM: 8.4
Sample A Male 8.4
Sample B Male 9.3
Sample C Female 10.9
Sample D Female 11.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
71610879 Antisense, RP_050927_02_A09, Mouse strain C57BL/6J (56 days, male) 3.4

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