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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:124.4 nTPM
HPA:124.4 nTPM
GTEx:87.2 nTPM
FANTOM5:99.1 Scaled Tags Per Million
Pig:81.0 nTPM
Mouse:69.7 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA075125
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 124.4
Sample id Sample description nTPM
Hippocampus
nTPM: 121.2
1898 Male, age 80, left hemisphere 126.0
2529 Female, age 94, left hemisphere 124.7
2621 Female, age 67, right hemisphere 121.6
2148 Female, age 91, left hemisphere 120.7
1911 Female, age 85, right hemisphere 117.8
1855 Male, age 76, left hemisphere 116.1
Dentate gyrus
nTPM: 120.6
2530 Female, age 94, left hemisphere 128.9
2528 Male, age 74, both hemispheres 125.0
2010 Male, age 76, both hemispheres 123.5
1927 Female, age 91, both hemispheres 121.8
2531 Female, age 67, both hemispheres 112.8
2246 Female, age 85, both hemispheres 111.7
Entorhinal gyrus
nTPM: 124.4
2764 Male, age 80, right hemisphere 135.1
2117 Female, age 91, right hemisphere 127.2
2613 Female, age 94, left hemisphere 127.0
1938 Female, age 85, left hemisphere 124.6
1787 Male, age 76, left hemisphere 123.3
2686 Male, age 75, right hemisphere 109.3
Hippocampus, CA1
nTPM: 119.5
2749 Male, age 80, left hemisphere 135.4
1873 Female, age 85, both hemispheres 120.2
2527 Male, age 74, both hemispheres 119.9
2045 Male, age 76, both hemispheres 112.6
2082 Female, age 91, right hemisphere 109.6
Hippocampus, CA2
nTPM: 120.7
1963 Male, age 80, left hemisphere 133.3
2249 Male, age 74, both hemispheres 133.3
1892 Male, age 76, both hemispheres 118.1
2437 Female, age 94, left hemisphere 118.0
1940 Female, age 85, left hemisphere 113.3
2113 Female, age 91, right hemisphere 108.2
Hippocampus, CA3
nTPM: 119.4
2620 Female, age 94, left hemisphere 131.7
2137 Male, age 80, left hemisphere 122.8
2436 Male, age 74, both hemispheres 122.5
1867 Male, age 76, both hemispheres 117.9
1891 Female, age 85, both hemispheres 111.1
2861 Female, age 67, both hemispheres 110.4
Parahippocampal cortex
nTPM: 115.4
1990 Female, age 91, right hemisphere 125.3
1933 Female, age 85, both hemispheres 120.9
2245 Female, age 91, both hemispheres 119.7
2532 Female, age 72, left hemisphere 117.4
2250 Female, age 67, right hemisphere 116.8
2018 Male, age 76, both hemispheres 114.5
1850 Male, age 80, both hemispheres 113.8
2622 Female, age 67, right hemisphere 113.5
2692 Male, age 74, both hemispheres 106.9
2693 Female, age 94, both hemispheres 105.7
Perirhinal gyrus
nTPM: 118.5
1794 Male, age 80, right hemisphere 125.2
1847 Female, age 91, left hemisphere 124.6
1841 Female, age 85, right hemisphere 115.0
2521 Female, age 94, right hemisphere 114.8
2848 Male, age 76, right hemisphere 112.9
Subiculum
nTPM: 119.3
1977 Female, age 85, both hemispheres 130.5
2619 Male, age 74, both hemispheres 124.6
1901 Male, age 80, both hemispheres 122.9
2729 Female, age 91, right hemisphere 116.4
2042 Male, age 76, both hemispheres 115.3
2438 Female, age 94, left hemisphere 105.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 87.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 87.2
Samples: 197

Max nTPM: 228.8
Min nTPM: 35.4
Std nTPM: 22.9
Median nTPM: 85.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 228.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 150.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 148.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 140.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 134.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 131.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 130.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 130.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 128.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 128.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 120.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 99.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 99.1
FF:10153-102I9 76 years, female 118.6
FF:10169-103B7 60 years, female 79.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 81.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 74.6
Samples: 4

Max nTPM: 93.2
Min nTPM: 64.5
Sample A Female 93.2
Sample B Female 71.9
Sample C Male 68.6
Sample D Male 64.5
Entorhinal cortex
nTPM: 65.2
Samples: 4

Max nTPM: 71.9
Min nTPM: 58.1
Sample A Female 65.6
Sample B Female 65.2
Sample C Male 71.9
Sample D Male 58.1
Subiculum
nTPM: 75.0
Samples: 4

Max nTPM: 100.1
Min nTPM: 59.6
Sample A Female 100.1
Sample B Female 68.1
Sample C Male 72.2
Sample D Male 59.6
Ventral hippocampus
nTPM: 81.0
Samples: 4

Max nTPM: 105.5
Min nTPM: 59.6
Sample A Female 80.8
Sample B Female 59.6
Sample C Male 105.5
Sample D Male 78.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 69.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.2
Samples: 4

Max nTPM: 63.0
Min nTPM: 57.5
Sample A Male 57.5
Sample B Male 59.5
Sample C Female 60.7
Sample D Female 63.0
Hippocampal formation
nTPM: 69.7
Samples: 4

Max nTPM: 77.7
Min nTPM: 65.3
Sample A Male 68.0
Sample B Male 67.6
Sample C Female 65.3
Sample D Female 77.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
74581086 Antisense, RP_060215_02_E06, Mouse strain C57BL/6J (56 days, male) 1.2

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The Human Protein Atlas

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