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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:60.1 nTPM
HPA:60.1 nTPM
GTEx:75.5 nTPM
FANTOM5:68.2 Scaled Tags Per Million
Pig:45.9 nTPM
Mouse:110.2 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056309
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.1
Sample id Sample description nTPM
Hippocampus
nTPM: 59.3
1898 Male, age 80, left hemisphere 62.2
2148 Female, age 91, left hemisphere 61.0
1855 Male, age 76, left hemisphere 59.5
2621 Female, age 67, right hemisphere 59.1
2529 Female, age 94, left hemisphere 59.0
1911 Female, age 85, right hemisphere 55.2
Dentate gyrus
nTPM: 59.0
2530 Female, age 94, left hemisphere 66.6
2531 Female, age 67, both hemispheres 61.7
2010 Male, age 76, both hemispheres 57.5
2246 Female, age 85, both hemispheres 57.2
1927 Female, age 91, both hemispheres 56.4
2528 Male, age 74, both hemispheres 54.5
Entorhinal gyrus
nTPM: 59.4
2764 Male, age 80, right hemisphere 63.5
1938 Female, age 85, left hemisphere 59.6
2613 Female, age 94, left hemisphere 58.9
1787 Male, age 76, left hemisphere 58.8
2686 Male, age 75, right hemisphere 58.6
2117 Female, age 91, right hemisphere 57.3
Hippocampus, CA1
nTPM: 58.3
2749 Male, age 80, left hemisphere 65.8
1873 Female, age 85, both hemispheres 60.8
2527 Male, age 74, both hemispheres 58.4
2045 Male, age 76, both hemispheres 54.7
2082 Female, age 91, right hemisphere 51.5
Hippocampus, CA2
nTPM: 57.4
1963 Male, age 80, left hemisphere 62.1
2437 Female, age 94, left hemisphere 60.7
1892 Male, age 76, both hemispheres 60.0
1940 Female, age 85, left hemisphere 55.6
2249 Male, age 74, both hemispheres 53.0
2113 Female, age 91, right hemisphere 52.9
Hippocampus, CA3
nTPM: 60.1
2137 Male, age 80, left hemisphere 66.8
2620 Female, age 94, left hemisphere 65.1
2861 Female, age 67, both hemispheres 60.8
1867 Male, age 76, both hemispheres 58.5
1891 Female, age 85, both hemispheres 55.8
2436 Male, age 74, both hemispheres 53.9
Parahippocampal cortex
nTPM: 56.8
2532 Female, age 72, left hemisphere 61.7
2245 Female, age 91, both hemispheres 59.1
1850 Male, age 80, both hemispheres 59.0
2692 Male, age 74, both hemispheres 58.4
2622 Female, age 67, right hemisphere 57.5
1933 Female, age 85, both hemispheres 57.1
1990 Female, age 91, right hemisphere 55.8
2018 Male, age 76, both hemispheres 53.7
2693 Female, age 94, both hemispheres 53.6
2250 Female, age 67, right hemisphere 52.3
Perirhinal gyrus
nTPM: 58.0
1794 Male, age 80, right hemisphere 63.4
2521 Female, age 94, right hemisphere 58.2
1847 Female, age 91, left hemisphere 58.0
1841 Female, age 85, right hemisphere 55.9
2848 Male, age 76, right hemisphere 54.4
Subiculum
nTPM: 58.0
1901 Male, age 80, both hemispheres 61.6
2438 Female, age 94, left hemisphere 59.0
1977 Female, age 85, both hemispheres 58.6
2619 Male, age 74, both hemispheres 58.2
2042 Male, age 76, both hemispheres 56.7
2729 Female, age 91, right hemisphere 53.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 75.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 75.5
Samples: 197

Max nTPM: 138.4
Min nTPM: 37.3
Std nTPM: 15.7
Median nTPM: 74.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 138.4
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 113.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 112.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 108.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 107.5
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 106.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 104.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 103.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 103.4
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 103.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 102.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.2
FF:10169-103B7 60 years, female 82.6
FF:10153-102I9 76 years, female 53.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 45.9
Samples: 4

Max nTPM: 60.7
Min nTPM: 36.5
Sample A Female 60.7
Sample B Female 46.5
Sample C Male 39.9
Sample D Male 36.5
Entorhinal cortex
nTPM: 41.3
Samples: 4

Max nTPM: 46.9
Min nTPM: 38.6
Sample A Female 46.9
Sample B Female 39.3
Sample C Male 40.3
Sample D Male 38.6
Subiculum
nTPM: 40.2
Samples: 4

Max nTPM: 51.3
Min nTPM: 34.4
Sample A Female 51.3
Sample B Female 37.7
Sample C Male 37.2
Sample D Male 34.4
Ventral hippocampus
nTPM: 43.1
Samples: 4

Max nTPM: 53.4
Min nTPM: 30.7
Sample A Female 45.6
Sample B Female 30.7
Sample C Male 53.4
Sample D Male 42.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 110.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 110.2
Samples: 4

Max nTPM: 111.4
Min nTPM: 108.1
Sample A Male 110.1
Sample B Male 111.2
Sample C Female 108.1
Sample D Female 111.4
Hippocampal formation
nTPM: 105.2
Samples: 4

Max nTPM: 112.7
Min nTPM: 99.0
Sample A Male 99.0
Sample B Male 103.4
Sample C Female 105.5
Sample D Female 112.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
68076557 Antisense, RP_040923_02_G06, Mouse strain C57BL/6J (56 days, male) 5.1

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