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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:134.0 nTPM
HPA:134.0 nTPM
GTEx:121.2 nTPM
FANTOM5:60.9 Scaled Tags Per Million
Pig:52.8 nTPM
Mouse:121.3 nTPM
Allen mouse:9.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057771
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 134.0
Sample id Sample description nTPM
Hippocampus
nTPM: 127.2
2529 Female, age 94, left hemisphere 140.2
2621 Female, age 67, right hemisphere 132.9
2148 Female, age 91, left hemisphere 127.8
1855 Male, age 76, left hemisphere 122.4
1898 Male, age 80, left hemisphere 120.4
1911 Female, age 85, right hemisphere 119.8
Dentate gyrus
nTPM: 118.5
2246 Female, age 85, both hemispheres 129.7
2530 Female, age 94, left hemisphere 122.1
2010 Male, age 76, both hemispheres 115.4
2531 Female, age 67, both hemispheres 115.0
1927 Female, age 91, both hemispheres 114.8
2528 Male, age 74, both hemispheres 113.9
Entorhinal gyrus
nTPM: 132.1
1787 Male, age 76, left hemisphere 154.9
1938 Female, age 85, left hemisphere 140.1
2686 Male, age 75, right hemisphere 130.9
2117 Female, age 91, right hemisphere 126.5
2764 Male, age 80, right hemisphere 121.4
2613 Female, age 94, left hemisphere 118.7
Hippocampus, CA1
nTPM: 126.3
2527 Male, age 74, both hemispheres 148.3
2749 Male, age 80, left hemisphere 142.0
2082 Female, age 91, right hemisphere 121.8
2045 Male, age 76, both hemispheres 110.0
1873 Female, age 85, both hemispheres 109.6
Hippocampus, CA2
nTPM: 126.0
2249 Male, age 74, both hemispheres 132.6
1940 Female, age 85, left hemisphere 132.5
2437 Female, age 94, left hemisphere 129.5
1963 Male, age 80, left hemisphere 124.8
2113 Female, age 91, right hemisphere 123.7
1892 Male, age 76, both hemispheres 113.2
Hippocampus, CA3
nTPM: 115.7
2861 Female, age 67, both hemispheres 126.9
2436 Male, age 74, both hemispheres 121.1
1867 Male, age 76, both hemispheres 115.6
1891 Female, age 85, both hemispheres 113.7
2137 Male, age 80, left hemisphere 112.4
2620 Female, age 94, left hemisphere 104.6
Parahippocampal cortex
nTPM: 134.0
2250 Female, age 67, right hemisphere 161.0
2692 Male, age 74, both hemispheres 142.4
1933 Female, age 85, both hemispheres 142.1
2622 Female, age 67, right hemisphere 141.8
2245 Female, age 91, both hemispheres 139.3
2532 Female, age 72, left hemisphere 130.2
2693 Female, age 94, both hemispheres 127.6
1990 Female, age 91, right hemisphere 127.5
2018 Male, age 76, both hemispheres 115.5
1850 Male, age 80, both hemispheres 113.0
Perirhinal gyrus
nTPM: 128.9
2521 Female, age 94, right hemisphere 149.1
1847 Female, age 91, left hemisphere 129.1
1794 Male, age 80, right hemisphere 128.2
1841 Female, age 85, right hemisphere 120.3
2848 Male, age 76, right hemisphere 117.6
Subiculum
nTPM: 121.2
2438 Female, age 94, left hemisphere 134.1
2619 Male, age 74, both hemispheres 129.9
1977 Female, age 85, both hemispheres 127.5
2729 Female, age 91, right hemisphere 120.0
1901 Male, age 80, both hemispheres 111.6
2042 Male, age 76, both hemispheres 103.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 121.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 121.2
Samples: 197

Max nTPM: 321.0
Min nTPM: 26.5
Std nTPM: 57.5
Median nTPM: 113.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 321.0
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 314.2
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 293.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 283.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 279.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 279.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 251.3
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 249.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 249.0
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 239.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 238.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.9
FF:10169-103B7 60 years, female 62.7
FF:10153-102I9 76 years, female 59.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.6
Samples: 4

Max nTPM: 35.8
Min nTPM: 25.2
Sample A Female 35.6
Sample B Female 35.8
Sample C Male 29.6
Sample D Male 25.2
Entorhinal cortex
nTPM: 52.8
Samples: 4

Max nTPM: 63.0
Min nTPM: 47.3
Sample A Female 63.0
Sample B Female 47.3
Sample C Male 52.0
Sample D Male 49.0
Subiculum
nTPM: 46.8
Samples: 4

Max nTPM: 58.8
Min nTPM: 38.5
Sample A Female 58.8
Sample B Female 45.1
Sample C Male 44.7
Sample D Male 38.5
Ventral hippocampus
nTPM: 41.8
Samples: 4

Max nTPM: 59.3
Min nTPM: 32.2
Sample A Female 37.0
Sample B Female 38.5
Sample C Male 59.3
Sample D Male 32.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 121.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 121.3
Samples: 4

Max nTPM: 140.9
Min nTPM: 98.7
Sample A Male 114.0
Sample B Male 140.9
Sample C Female 98.7
Sample D Female 131.5
Hippocampal formation
nTPM: 46.1
Samples: 4

Max nTPM: 58.4
Min nTPM: 34.9
Sample A Male 55.0
Sample B Male 36.1
Sample C Female 34.9
Sample D Female 58.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.1
71717155 Antisense, RP_050524_03_C10, Mouse strain C57BL/6J (56 days, male) 9.1
70228328 Antisense, RP_050524_03_C10, Mouse strain C57BL/6J (56 days, male) 5.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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