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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:108.5 nTPM
HPA:108.5 nTPM
GTEx:178.3 nTPM
FANTOM5:421.8 Scaled Tags Per Million
Pig:82.5 nTPM
Mouse:370.7 nTPM
Allen mouse:25.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024305Antibody HPA052171Antibody CAB018655Antibody CAB040563
Glial cells Not detectedMediumLowLow
Neuronal cells MediumMediumMediumMedium









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 108.5
Sample id Sample description nTPM
Hippocampus
nTPM: 62.4
1898 Male, age 80, left hemisphere 96.9
2621 Female, age 67, right hemisphere 69.1
1855 Male, age 76, left hemisphere 63.1
2148 Female, age 91, left hemisphere 59.5
2529 Female, age 94, left hemisphere 45.8
1911 Female, age 85, right hemisphere 39.9
Dentate gyrus
nTPM: 66.7
1927 Female, age 91, both hemispheres 105.2
2010 Male, age 76, both hemispheres 67.7
2530 Female, age 94, left hemisphere 67.7
2531 Female, age 67, both hemispheres 57.2
2528 Male, age 74, both hemispheres 51.4
2246 Female, age 85, both hemispheres 51.1
Entorhinal gyrus
nTPM: 78.5
2613 Female, age 94, left hemisphere 119.4
2764 Male, age 80, right hemisphere 106.1
1938 Female, age 85, left hemisphere 84.1
1787 Male, age 76, left hemisphere 64.9
2686 Male, age 75, right hemisphere 61.8
2117 Female, age 91, right hemisphere 34.7
Hippocampus, CA1
nTPM: 73.7
2749 Male, age 80, left hemisphere 114.2
2045 Male, age 76, both hemispheres 70.8
2527 Male, age 74, both hemispheres 68.3
1873 Female, age 85, both hemispheres 64.5
2082 Female, age 91, right hemisphere 50.7
Hippocampus, CA2
nTPM: 65.7
1892 Male, age 76, both hemispheres 89.7
1963 Male, age 80, left hemisphere 85.1
2437 Female, age 94, left hemisphere 69.5
2249 Male, age 74, both hemispheres 54.1
2113 Female, age 91, right hemisphere 48.2
1940 Female, age 85, left hemisphere 47.7
Hippocampus, CA3
nTPM: 74.9
2620 Female, age 94, left hemisphere 97.9
2436 Male, age 74, both hemispheres 92.4
2137 Male, age 80, left hemisphere 74.1
1867 Male, age 76, both hemispheres 71.6
2861 Female, age 67, both hemispheres 65.2
1891 Female, age 85, both hemispheres 48.2
Parahippocampal cortex
nTPM: 77.3
1850 Male, age 80, both hemispheres 112.3
1933 Female, age 85, both hemispheres 87.2
1990 Female, age 91, right hemisphere 87.0
2532 Female, age 72, left hemisphere 79.7
2693 Female, age 94, both hemispheres 79.1
2245 Female, age 91, both hemispheres 77.1
2622 Female, age 67, right hemisphere 69.4
2018 Male, age 76, both hemispheres 65.4
2250 Female, age 67, right hemisphere 63.9
2692 Male, age 74, both hemispheres 52.3
Perirhinal gyrus
nTPM: 108.5
1847 Female, age 91, left hemisphere 163.1
1794 Male, age 80, right hemisphere 121.4
1841 Female, age 85, right hemisphere 103.2
2521 Female, age 94, right hemisphere 87.6
2848 Male, age 76, right hemisphere 67.4
Subiculum
nTPM: 49.2
1977 Female, age 85, both hemispheres 63.4
2619 Male, age 74, both hemispheres 62.5
1901 Male, age 80, both hemispheres 58.1
2438 Female, age 94, left hemisphere 48.9
2729 Female, age 91, right hemisphere 33.9
2042 Male, age 76, both hemispheres 28.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 178.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 178.3
Samples: 197

Max nTPM: 426.5
Min nTPM: 67.9
Std nTPM: 69.6
Median nTPM: 166.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 426.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 375.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 363.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 361.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 332.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 330.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 327.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 310.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 310.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 299.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 293.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 421.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 421.8
FF:10169-103B7 60 years, female 542.0
FF:10153-102I9 76 years, female 301.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 82.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 82.5
Samples: 4

Max nTPM: 113.6
Min nTPM: 61.4
Sample A Female 113.6
Sample B Female 82.6
Sample C Male 72.2
Sample D Male 61.4
Entorhinal cortex
nTPM: 70.8
Samples: 4

Max nTPM: 81.2
Min nTPM: 62.8
Sample A Female 81.2
Sample B Female 70.9
Sample C Male 68.2
Sample D Male 62.8
Subiculum
nTPM: 69.9
Samples: 4

Max nTPM: 86.8
Min nTPM: 63.4
Sample A Female 86.8
Sample B Female 63.4
Sample C Male 65.3
Sample D Male 64.0
Ventral hippocampus
nTPM: 79.5
Samples: 4

Max nTPM: 96.4
Min nTPM: 51.2
Sample A Female 88.2
Sample B Female 51.2
Sample C Male 96.4
Sample D Male 82.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 370.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 340.4
Samples: 4

Max nTPM: 346.0
Min nTPM: 330.1
Sample A Male 346.0
Sample B Male 339.9
Sample C Female 330.1
Sample D Female 345.4
Hippocampal formation
nTPM: 370.7
Samples: 4

Max nTPM: 400.9
Min nTPM: 346.5
Sample A Male 384.3
Sample B Male 400.9
Sample C Female 346.5
Sample D Female 350.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 25.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 25.5
100144120 Antisense, RP_110407_02_H10, Mouse strain C57BL/6J (56 days, male) 25.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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