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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA036762
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - Extended tissue profilei
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA036763
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Low
Inner nuclear layer
Not detected
Inner plexiform layer
Low
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 416.4
Min nTPM: 105.0
Std nTPM: 70.8
Median nTPM:
237_1
82 years, male
416.4
379_1
60 years, male
409.1
375_1
74 years, female
407.4
218_1
71 years, female
394.3
316_1
62 years, male
380.1
319_1
81 years, male
379.7
447_1
81 years, male
368.5
35_1
74 years, female
368.0
386_1
76 years, male
364.7
286_1
68 years, female
358.7
163_1
78 years, male
357.6
354_1
81 years, female
349.5
376_1
75 years, female
332.1
243_1
75 years, male
330.0
6_1
73 years, female
316.6
396_1
62 years, male
313.7
172_1
72 years, female
312.3
217_1
76 years, male
306.1
355_1
70 years, female
305.3
353_1
82 years, female
295.7
322_1
76 years, male
294.4
377_1
82 years, female
290.6
229_1
69 years, female
286.4
384_1
83 years, male
284.1
349_1
83 years, male
283.3
518_1
75 years, female
282.4
503_1
68 years, male
278.9
177_1
74 years, male
277.3
318_1
68 years, male
275.0
352_1
62 years, male
274.1
356_1
87 years, female
272.7
265_1
87 years, male
269.6
320_1
89 years, female
268.8
348_1
84 years, male
264.2
335_1
73 years, female
262.9
351_1
91 years, male
262.7
350_1
84 years, female
260.9
347_1
72 years, male
259.8
311_1
78 years, male
247.2
246_1
77 years, male
247.1
313_1
79 years, female
247.1
173_1
67 years, male
245.4
405_1
91 years, male
244.3
506_1
65 years, male
243.0
251_1
78 years, male
238.9
153_1
70 years, female
237.9
292_1
71 years, male
234.6
425_1
59 years, female
234.4
264_1
73 years, female
230.4
189_1
76 years, male
228.7
142_1
61 years, female
227.9
43_1
64 years, female
227.2
324_1
76 years, male
225.2
468_1
89 years, male
224.8
526_1
61 years, male
222.5
389_1
86 years, female
221.7
415_1
77 years, female
219.1
307_1
66 years, female
218.2
81_1
67 years, male
216.5
17_1
71 years, male
216.3
4_1
88 years, female
211.8
315_1
62 years, female
210.5
394_1
75 years, female
208.8
452_1
88 years, female
208.1
115_1
83 years, male
207.8
126_1
63 years, male
207.0
321_1
62 years, female
206.0
406_1
79 years, male
205.0
99_1
64 years, male
204.8
32_1
67 years, male
204.4
162_1
79 years, female
204.1
404_1
82 years, female
200.1
414_1
84 years, female
197.2
499_1
55 years, female
193.8
145_1
84 years, male
193.6
42_1
85 years, male
188.9
480_1
63 years, male
187.2
293_1
68 years, female
187.1
109_1
81 years, female
185.3
517_1
88 years, male
184.3
266_1
85 years, male
181.0
254_1
77 years, female
180.6
466_1
57 years, female
180.6
117_1
61 years, male
180.1
120_1
70 years, female
179.2
291_1
76 years, male
172.0
9_1
66 years, female
170.8
490_1
67 years, female
168.7
18_1
88 years, male
168.5
288_1
66 years, female
167.6
314_1
67 years, male
167.0
295_1
61 years, female
165.0
137_1
83 years, male
164.8
2_1
77 years, female
163.4
139_1
64 years, female
160.0
317_1
60 years, male
157.4
149_1
88 years, male
153.4
413_1
59 years, female
151.2
491_1
89 years, female
146.7
501_1
88 years, male
142.8
41_1
94 years, female
135.6
119_1
70 years, female
131.1
495_1
57 years, female
125.6
308_1
70 years, female
117.1
89_1
63 years, male
105.0
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.