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PTPRS
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:34.3 nTPM
HPA:34.3 nTPM
GTEx:20.9 nTPM
FANTOM5:51.1 Scaled Tags Per Million
Pig:96.3 nTPM
Mouse:83.6 nTPM
Allen mouse:14.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.3
Sample id Sample description nTPM
Hippocampus
nTPM: 28.1
1855 Male, age 76, left hemisphere 43.7
1898 Male, age 80, left hemisphere 40.4
2148 Female, age 91, left hemisphere 30.4
2621 Female, age 67, right hemisphere 27.2
2529 Female, age 94, left hemisphere 17.4
1911 Female, age 85, right hemisphere 9.5
Dentate gyrus
nTPM: 29.2
2530 Female, age 94, left hemisphere 42.3
2010 Male, age 76, both hemispheres 39.9
2531 Female, age 67, both hemispheres 28.4
2528 Male, age 74, both hemispheres 22.9
2246 Female, age 85, both hemispheres 21.2
1927 Female, age 91, both hemispheres 20.8
Entorhinal gyrus
nTPM: 22.3
2613 Female, age 94, left hemisphere 46.6
2764 Male, age 80, right hemisphere 33.1
2117 Female, age 91, right hemisphere 22.6
1787 Male, age 76, left hemisphere 18.0
1938 Female, age 85, left hemisphere 7.5
2686 Male, age 75, right hemisphere 6.1
Hippocampus, CA1
nTPM: 34.3
2749 Male, age 80, left hemisphere 75.8
2527 Male, age 74, both hemispheres 33.3
1873 Female, age 85, both hemispheres 25.9
2045 Male, age 76, both hemispheres 21.8
2082 Female, age 91, right hemisphere 14.6
Hippocampus, CA2
nTPM: 21.6
1963 Male, age 80, left hemisphere 49.7
1892 Male, age 76, both hemispheres 32.0
2437 Female, age 94, left hemisphere 20.6
2249 Male, age 74, both hemispheres 14.6
2113 Female, age 91, right hemisphere 8.9
1940 Female, age 85, left hemisphere 3.9
Hippocampus, CA3
nTPM: 28.2
2861 Female, age 67, both hemispheres 51.2
2137 Male, age 80, left hemisphere 47.1
2620 Female, age 94, left hemisphere 35.2
1867 Male, age 76, both hemispheres 21.8
1891 Female, age 85, both hemispheres 7.9
2436 Male, age 74, both hemispheres 6.1
Parahippocampal cortex
nTPM: 14.7
2018 Male, age 76, both hemispheres 26.1
2622 Female, age 67, right hemisphere 19.7
2245 Female, age 91, both hemispheres 18.5
1933 Female, age 85, both hemispheres 15.3
2532 Female, age 72, left hemisphere 14.9
2693 Female, age 94, both hemispheres 13.8
2250 Female, age 67, right hemisphere 11.0
2692 Male, age 74, both hemispheres 9.8
1990 Female, age 91, right hemisphere 9.6
1850 Male, age 80, both hemispheres 8.8
Perirhinal gyrus
nTPM: 17.8
2521 Female, age 94, right hemisphere 29.6
1847 Female, age 91, left hemisphere 26.6
1794 Male, age 80, right hemisphere 18.2
2848 Male, age 76, right hemisphere 14.9
1841 Female, age 85, right hemisphere 0.0
Subiculum
nTPM: 18.1
1901 Male, age 80, both hemispheres 24.6
2729 Female, age 91, right hemisphere 21.5
1977 Female, age 85, both hemispheres 20.2
2619 Male, age 74, both hemispheres 19.3
2042 Male, age 76, both hemispheres 13.2
2438 Female, age 94, left hemisphere 9.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.9
Samples: 197

Max nTPM: 54.4
Min nTPM: 6.0
Std nTPM: 8.0
Median nTPM: 19.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 54.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 45.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 45.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 44.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 43.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 41.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 37.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 37.4
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 37.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 36.4
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 34.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.1
FF:10153-102I9 76 years, female 64.6
FF:10169-103B7 60 years, female 37.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 96.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 95.7
Samples: 4

Max nTPM: 124.6
Min nTPM: 62.2
Sample A Female 124.6
Sample B Female 112.5
Sample C Male 83.4
Sample D Male 62.2
Entorhinal cortex
nTPM: 84.7
Samples: 4

Max nTPM: 98.2
Min nTPM: 76.0
Sample A Female 98.2
Sample B Female 77.6
Sample C Male 87.1
Sample D Male 76.0
Subiculum
nTPM: 76.5
Samples: 4

Max nTPM: 95.6
Min nTPM: 64.5
Sample A Female 95.6
Sample B Female 67.5
Sample C Male 78.5
Sample D Male 64.5
Ventral hippocampus
nTPM: 96.3
Samples: 4

Max nTPM: 120.0
Min nTPM: 60.4
Sample A Female 92.7
Sample B Female 60.4
Sample C Male 111.9
Sample D Male 120.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 83.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 80.3
Samples: 4

Max nTPM: 88.8
Min nTPM: 74.4
Sample A Male 75.4
Sample B Male 82.4
Sample C Female 74.4
Sample D Female 88.8
Hippocampal formation
nTPM: 83.6
Samples: 4

Max nTPM: 93.8
Min nTPM: 72.9
Sample A Male 72.9
Sample B Male 93.8
Sample C Female 86.2
Sample D Female 81.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.8
69817751 Antisense, RP_050510_03_F12, Mouse strain C57BL/6J (56 days, male) 15.3
74882787 Antisense, RP_060315_04_G10, Mouse strain C57BL/6J (56 days, male) 14.4

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