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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:12.1 nTPM
HPA:12.1 nTPM
GTEx:16.8 nTPM
FANTOM5:7.4 Scaled Tags Per Million
Pig:9.5 nTPM
Mouse:14.7 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041439
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.1
Sample id Sample description nTPM
Hippocampus
nTPM: 11.9
1855 Male, age 76, left hemisphere 14.1
2621 Female, age 67, right hemisphere 12.5
1898 Male, age 80, left hemisphere 11.8
2529 Female, age 94, left hemisphere 11.4
2148 Female, age 91, left hemisphere 11.0
1911 Female, age 85, right hemisphere 10.8
Dentate gyrus
nTPM: 11.5
2530 Female, age 94, left hemisphere 13.6
2531 Female, age 67, both hemispheres 13.1
2010 Male, age 76, both hemispheres 11.2
1927 Female, age 91, both hemispheres 10.8
2246 Female, age 85, both hemispheres 10.7
2528 Male, age 74, both hemispheres 9.5
Entorhinal gyrus
nTPM: 11.9
2613 Female, age 94, left hemisphere 13.2
2764 Male, age 80, right hemisphere 12.9
2686 Male, age 75, right hemisphere 12.6
1787 Male, age 76, left hemisphere 11.6
2117 Female, age 91, right hemisphere 10.7
1938 Female, age 85, left hemisphere 10.2
Hippocampus, CA1
nTPM: 11.0
2045 Male, age 76, both hemispheres 11.4
2082 Female, age 91, right hemisphere 11.0
2749 Male, age 80, left hemisphere 11.0
1873 Female, age 85, both hemispheres 10.8
2527 Male, age 74, both hemispheres 10.7
Hippocampus, CA2
nTPM: 11.0
2437 Female, age 94, left hemisphere 12.7
1963 Male, age 80, left hemisphere 11.9
1940 Female, age 85, left hemisphere 11.3
1892 Male, age 76, both hemispheres 10.4
2113 Female, age 91, right hemisphere 10.0
2249 Male, age 74, both hemispheres 9.8
Hippocampus, CA3
nTPM: 12.1
2861 Female, age 67, both hemispheres 17.0
2620 Female, age 94, left hemisphere 15.0
2137 Male, age 80, left hemisphere 11.0
1867 Male, age 76, both hemispheres 10.9
1891 Female, age 85, both hemispheres 10.3
2436 Male, age 74, both hemispheres 8.7
Parahippocampal cortex
nTPM: 11.3
2622 Female, age 67, right hemisphere 14.2
2693 Female, age 94, both hemispheres 11.7
2245 Female, age 91, both hemispheres 11.6
2532 Female, age 72, left hemisphere 11.4
2692 Male, age 74, both hemispheres 11.4
1933 Female, age 85, both hemispheres 10.9
2018 Male, age 76, both hemispheres 10.8
1850 Male, age 80, both hemispheres 10.7
1990 Female, age 91, right hemisphere 10.2
2250 Female, age 67, right hemisphere 10.0
Perirhinal gyrus
nTPM: 10.6
1794 Male, age 80, right hemisphere 10.8
2521 Female, age 94, right hemisphere 10.8
2848 Male, age 76, right hemisphere 10.6
1841 Female, age 85, right hemisphere 10.5
1847 Female, age 91, left hemisphere 10.4
Subiculum
nTPM: 11.0
2042 Male, age 76, both hemispheres 11.9
2619 Male, age 74, both hemispheres 11.7
1901 Male, age 80, both hemispheres 11.4
2729 Female, age 91, right hemisphere 10.8
1977 Female, age 85, both hemispheres 10.1
2438 Female, age 94, left hemisphere 10.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.8
Samples: 197

Max nTPM: 35.7
Min nTPM: 5.5
Std nTPM: 5.3
Median nTPM: 16.6
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 35.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 31.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 31.6
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 31.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 30.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 30.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 29.5
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 29.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 28.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 26.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 26.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 7.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 7.4
FF:10153-102I9 76 years, female 8.7
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.5
Samples: 4

Max nTPM: 11.1
Min nTPM: 8.5
Sample A Female 11.1
Sample B Female 9.7
Sample C Male 8.5
Sample D Male 8.8
Entorhinal cortex
nTPM: 9.0
Samples: 4

Max nTPM: 9.8
Min nTPM: 8.1
Sample A Female 9.8
Sample B Female 8.1
Sample C Male 8.8
Sample D Male 9.3
Subiculum
nTPM: 8.1
Samples: 4

Max nTPM: 9.4
Min nTPM: 7.3
Sample A Female 9.4
Sample B Female 7.5
Sample C Male 8.2
Sample D Male 7.3
Ventral hippocampus
nTPM: 9.3
Samples: 4

Max nTPM: 11.3
Min nTPM: 6.9
Sample A Female 9.4
Sample B Female 6.9
Sample C Male 11.3
Sample D Male 9.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.4
Samples: 4

Max nTPM: 14.2
Min nTPM: 11.3
Sample A Male 11.3
Sample B Male 14.2
Sample C Female 12.3
Sample D Female 11.9
Hippocampal formation
nTPM: 14.7
Samples: 4

Max nTPM: 15.6
Min nTPM: 13.4
Sample A Male 13.4
Sample B Male 15.4
Sample C Female 14.5
Sample D Female 15.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
393264 Antisense, RP_040809_01_B06, Mouse strain C57BL/6J (56 days, male) 3.1

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The Human Protein Atlas

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