ABOUTMENU
HELP
NEWS
GCDH
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:19.2 nTPM
HPA:19.2 nTPM
GTEx:12.4 nTPM
FANTOM5:19.8 Scaled Tags Per Million
Pig:32.3 nTPM
Mouse:20.8 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043252Antibody HPA048492
Glial cells MediumMedium
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.2
Sample id Sample description nTPM
Hippocampus
nTPM: 18.7
2529 Female, age 94, left hemisphere 20.6
1911 Female, age 85, right hemisphere 19.7
2148 Female, age 91, left hemisphere 19.3
1855 Male, age 76, left hemisphere 18.0
1898 Male, age 80, left hemisphere 17.9
2621 Female, age 67, right hemisphere 17.0
Dentate gyrus
nTPM: 18.4
2528 Male, age 74, both hemispheres 20.6
2246 Female, age 85, both hemispheres 19.4
2530 Female, age 94, left hemisphere 18.5
2531 Female, age 67, both hemispheres 18.0
1927 Female, age 91, both hemispheres 17.0
2010 Male, age 76, both hemispheres 16.9
Entorhinal gyrus
nTPM: 19.2
2117 Female, age 91, right hemisphere 20.7
1938 Female, age 85, left hemisphere 20.1
2613 Female, age 94, left hemisphere 18.8
2764 Male, age 80, right hemisphere 18.7
1787 Male, age 76, left hemisphere 18.5
2686 Male, age 75, right hemisphere 18.5
Hippocampus, CA1
nTPM: 18.4
2527 Male, age 74, both hemispheres 22.0
1873 Female, age 85, both hemispheres 19.4
2082 Female, age 91, right hemisphere 18.3
2749 Male, age 80, left hemisphere 17.1
2045 Male, age 76, both hemispheres 15.3
Hippocampus, CA2
nTPM: 18.6
2249 Male, age 74, both hemispheres 20.6
2113 Female, age 91, right hemisphere 18.9
1963 Male, age 80, left hemisphere 18.8
2437 Female, age 94, left hemisphere 18.3
1940 Female, age 85, left hemisphere 18.2
1892 Male, age 76, both hemispheres 17.0
Hippocampus, CA3
nTPM: 17.8
1891 Female, age 85, both hemispheres 19.8
2436 Male, age 74, both hemispheres 19.8
2620 Female, age 94, left hemisphere 17.6
1867 Male, age 76, both hemispheres 17.3
2137 Male, age 80, left hemisphere 16.6
2861 Female, age 67, both hemispheres 15.5
Parahippocampal cortex
nTPM: 18.8
2692 Male, age 74, both hemispheres 20.7
2622 Female, age 67, right hemisphere 20.2
1933 Female, age 85, both hemispheres 20.1
2245 Female, age 91, both hemispheres 19.3
1990 Female, age 91, right hemisphere 19.2
2250 Female, age 67, right hemisphere 19.1
2693 Female, age 94, both hemispheres 18.4
1850 Male, age 80, both hemispheres 18.1
2532 Female, age 72, left hemisphere 17.3
2018 Male, age 76, both hemispheres 16.1
Perirhinal gyrus
nTPM: 18.2
1847 Female, age 91, left hemisphere 19.2
1794 Male, age 80, right hemisphere 18.5
2521 Female, age 94, right hemisphere 18.5
1841 Female, age 85, right hemisphere 18.0
2848 Male, age 76, right hemisphere 16.8
Subiculum
nTPM: 19.2
2619 Male, age 74, both hemispheres 22.2
1901 Male, age 80, both hemispheres 20.2
2729 Female, age 91, right hemisphere 19.2
1977 Female, age 85, both hemispheres 18.9
2042 Male, age 76, both hemispheres 18.6
2438 Female, age 94, left hemisphere 16.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.4
Samples: 197

Max nTPM: 23.9
Min nTPM: 2.8
Std nTPM: 3.4
Median nTPM: 12.1
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 23.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 23.5
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 23.2
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 20.7
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 20.6
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 20.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 20.2
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 19.9
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 19.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 19.1
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 18.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.8
FF:10169-103B7 60 years, female 20.9
FF:10153-102I9 76 years, female 18.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.6
Samples: 4

Max nTPM: 35.7
Min nTPM: 24.4
Sample A Female 33.9
Sample B Female 28.3
Sample C Male 35.7
Sample D Male 24.4
Entorhinal cortex
nTPM: 31.3
Samples: 4

Max nTPM: 46.5
Min nTPM: 24.6
Sample A Female 25.0
Sample B Female 24.6
Sample C Male 46.5
Sample D Male 29.0
Subiculum
nTPM: 30.3
Samples: 4

Max nTPM: 32.5
Min nTPM: 26.0
Sample A Female 32.5
Sample B Female 31.6
Sample C Male 31.0
Sample D Male 26.0
Ventral hippocampus
nTPM: 32.3
Samples: 4

Max nTPM: 39.2
Min nTPM: 27.7
Sample A Female 32.2
Sample B Female 30.0
Sample C Male 39.2
Sample D Male 27.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.4
Samples: 4

Max nTPM: 22.7
Min nTPM: 19.3
Sample A Male 19.4
Sample B Male 20.0
Sample C Female 22.7
Sample D Female 19.3
Hippocampal formation
nTPM: 20.8
Samples: 4

Max nTPM: 22.5
Min nTPM: 19.1
Sample A Male 21.2
Sample B Male 19.1
Sample C Female 20.5
Sample D Female 22.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
69289039 Antisense, RP_050407_02_C08, Mouse strain C57BL/6J (56 days, male) 0.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.