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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:26.5 nTPM
HPA:26.5 nTPM
GTEx:69.5 nTPM
FANTOM5:28.2 Scaled Tags Per Million
Pig:25.9 nTPM
Mouse:26.1 nTPM
Allen mouse:4.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034958
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.5
Sample id Sample description nTPM
Hippocampus
nTPM: 26.5
1855 Male, age 76, left hemisphere 29.6
2621 Female, age 67, right hemisphere 29.2
2529 Female, age 94, left hemisphere 26.4
2148 Female, age 91, left hemisphere 25.3
1911 Female, age 85, right hemisphere 24.8
1898 Male, age 80, left hemisphere 23.4
Dentate gyrus
nTPM: 24.7
2530 Female, age 94, left hemisphere 28.3
2531 Female, age 67, both hemispheres 26.0
2246 Female, age 85, both hemispheres 25.4
2010 Male, age 76, both hemispheres 23.2
2528 Male, age 74, both hemispheres 22.9
1927 Female, age 91, both hemispheres 22.4
Entorhinal gyrus
nTPM: 23.5
2686 Male, age 75, right hemisphere 25.5
2764 Male, age 80, right hemisphere 25.5
1938 Female, age 85, left hemisphere 24.1
2613 Female, age 94, left hemisphere 23.5
1787 Male, age 76, left hemisphere 21.9
2117 Female, age 91, right hemisphere 20.3
Hippocampus, CA1
nTPM: 24.0
2045 Male, age 76, both hemispheres 25.2
2527 Male, age 74, both hemispheres 24.7
1873 Female, age 85, both hemispheres 24.6
2082 Female, age 91, right hemisphere 23.3
2749 Male, age 80, left hemisphere 22.5
Hippocampus, CA2
nTPM: 24.2
1892 Male, age 76, both hemispheres 25.5
1940 Female, age 85, left hemisphere 25.5
2113 Female, age 91, right hemisphere 25.0
2437 Female, age 94, left hemisphere 24.3
1963 Male, age 80, left hemisphere 22.9
2249 Male, age 74, both hemispheres 21.7
Hippocampus, CA3
nTPM: 25.7
2861 Female, age 67, both hemispheres 31.0
1867 Male, age 76, both hemispheres 26.4
2620 Female, age 94, left hemisphere 26.0
2137 Male, age 80, left hemisphere 24.9
1891 Female, age 85, both hemispheres 23.9
2436 Male, age 74, both hemispheres 21.6
Parahippocampal cortex
nTPM: 25.0
2622 Female, age 67, right hemisphere 27.7
1933 Female, age 85, both hemispheres 27.1
2245 Female, age 91, both hemispheres 27.0
2532 Female, age 72, left hemisphere 25.4
2250 Female, age 67, right hemisphere 24.5
2693 Female, age 94, both hemispheres 24.1
2018 Male, age 76, both hemispheres 24.0
1850 Male, age 80, both hemispheres 23.7
2692 Male, age 74, both hemispheres 23.5
1990 Female, age 91, right hemisphere 23.2
Perirhinal gyrus
nTPM: 24.7
1841 Female, age 85, right hemisphere 26.4
1794 Male, age 80, right hemisphere 25.2
2521 Female, age 94, right hemisphere 24.8
1847 Female, age 91, left hemisphere 24.7
2848 Male, age 76, right hemisphere 22.6
Subiculum
nTPM: 24.2
2438 Female, age 94, left hemisphere 27.8
2042 Male, age 76, both hemispheres 25.3
1901 Male, age 80, both hemispheres 24.1
2729 Female, age 91, right hemisphere 23.2
2619 Male, age 74, both hemispheres 22.6
1977 Female, age 85, both hemispheres 22.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 69.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 69.5
Samples: 197

Max nTPM: 219.8
Min nTPM: 22.6
Std nTPM: 27.1
Median nTPM: 63.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 219.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 205.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 170.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 144.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 136.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 133.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 132.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 126.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 118.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 118.4
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 115.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.2
FF:10169-103B7 60 years, female 28.2
FF:10153-102I9 76 years, female 28.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.9
Samples: 4

Max nTPM: 32.6
Min nTPM: 20.7
Sample A Female 32.6
Sample B Female 21.7
Sample C Male 28.6
Sample D Male 20.7
Entorhinal cortex
nTPM: 25.4
Samples: 4

Max nTPM: 27.1
Min nTPM: 24.0
Sample A Female 25.1
Sample B Female 27.1
Sample C Male 25.3
Sample D Male 24.0
Subiculum
nTPM: 22.6
Samples: 4

Max nTPM: 32.5
Min nTPM: 18.6
Sample A Female 32.5
Sample B Female 18.6
Sample C Male 19.9
Sample D Male 19.5
Ventral hippocampus
nTPM: 23.5
Samples: 4

Max nTPM: 28.0
Min nTPM: 16.7
Sample A Female 23.5
Sample B Female 16.7
Sample C Male 28.0
Sample D Male 25.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.7
Samples: 4

Max nTPM: 25.5
Min nTPM: 22.2
Sample A Male 22.3
Sample B Male 24.9
Sample C Female 25.5
Sample D Female 22.2
Hippocampal formation
nTPM: 26.1
Samples: 4

Max nTPM: 28.6
Min nTPM: 23.8
Sample A Male 28.6
Sample B Male 24.5
Sample C Female 23.8
Sample D Female 27.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.1
69170270 Antisense, RP_050329_01_A06, Mouse strain C57BL/6J (56 days, male) 6.6
80472079 Antisense, RP_070219_01_C08, Mouse strain C57BL/6J (56 days, male) 1.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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