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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:19.4 nTPM
HPA:19.4 nTPM
GTEx:16.5 nTPM
FANTOM5:17.4 Scaled Tags Per Million
Pig:10.4 nTPM
Mouse:20.4 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007931Antibody HPA008232Antibody CAB020720
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.4
Sample id Sample description nTPM
Hippocampus
nTPM: 11.8
2529 Female, age 94, left hemisphere 13.4
2621 Female, age 67, right hemisphere 12.2
1898 Male, age 80, left hemisphere 11.9
2148 Female, age 91, left hemisphere 11.6
1911 Female, age 85, right hemisphere 11.5
1855 Male, age 76, left hemisphere 10.3
Dentate gyrus
nTPM: 12.2
2530 Female, age 94, left hemisphere 13.2
2010 Male, age 76, both hemispheres 12.7
2531 Female, age 67, both hemispheres 12.3
2246 Female, age 85, both hemispheres 11.9
1927 Female, age 91, both hemispheres 11.6
2528 Male, age 74, both hemispheres 11.6
Entorhinal gyrus
nTPM: 11.1
2764 Male, age 80, right hemisphere 12.1
2686 Male, age 75, right hemisphere 12.0
1787 Male, age 76, left hemisphere 11.6
2117 Female, age 91, right hemisphere 11.5
1938 Female, age 85, left hemisphere 10.0
2613 Female, age 94, left hemisphere 9.7
Hippocampus, CA1
nTPM: 12.1
2082 Female, age 91, right hemisphere 17.3
2527 Male, age 74, both hemispheres 11.9
1873 Female, age 85, both hemispheres 10.9
2045 Male, age 76, both hemispheres 10.8
2749 Male, age 80, left hemisphere 9.8
Hippocampus, CA2
nTPM: 13.9
2249 Male, age 74, both hemispheres 22.9
2113 Female, age 91, right hemisphere 13.0
1940 Female, age 85, left hemisphere 12.4
2437 Female, age 94, left hemisphere 12.3
1963 Male, age 80, left hemisphere 12.2
1892 Male, age 76, both hemispheres 10.4
Hippocampus, CA3
nTPM: 19.4
2436 Male, age 74, both hemispheres 61.6
2861 Female, age 67, both hemispheres 13.0
2620 Female, age 94, left hemisphere 11.4
1867 Male, age 76, both hemispheres 11.3
1891 Female, age 85, both hemispheres 9.7
2137 Male, age 80, left hemisphere 9.5
Parahippocampal cortex
nTPM: 10.9
2250 Female, age 67, right hemisphere 12.0
2018 Male, age 76, both hemispheres 11.9
1990 Female, age 91, right hemisphere 11.6
2622 Female, age 67, right hemisphere 11.3
1850 Male, age 80, both hemispheres 10.9
1933 Female, age 85, both hemispheres 10.9
2245 Female, age 91, both hemispheres 10.9
2532 Female, age 72, left hemisphere 10.2
2693 Female, age 94, both hemispheres 9.6
2692 Male, age 74, both hemispheres 9.5
Perirhinal gyrus
nTPM: 11.0
1794 Male, age 80, right hemisphere 12.1
2848 Male, age 76, right hemisphere 12.0
1841 Female, age 85, right hemisphere 11.5
1847 Female, age 91, left hemisphere 10.4
2521 Female, age 94, right hemisphere 9.1
Subiculum
nTPM: 10.9
1977 Female, age 85, both hemispheres 12.1
2438 Female, age 94, left hemisphere 11.7
2729 Female, age 91, right hemisphere 11.4
2042 Male, age 76, both hemispheres 10.1
2619 Male, age 74, both hemispheres 10.0
1901 Male, age 80, both hemispheres 9.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.5
Samples: 197

Max nTPM: 40.5
Min nTPM: 1.8
Std nTPM: 6.7
Median nTPM: 15.4
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 40.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 37.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 37.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 36.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 35.6
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 33.2
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 30.6
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 29.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 28.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 28.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 28.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.4
FF:10153-102I9 76 years, female 24.4
FF:10169-103B7 60 years, female 10.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.6
Samples: 4

Max nTPM: 9.1
Min nTPM: 5.9
Sample A Female 7.5
Sample B Female 7.7
Sample C Male 9.1
Sample D Male 5.9
Entorhinal cortex
nTPM: 10.4
Samples: 4

Max nTPM: 12.5
Min nTPM: 7.6
Sample A Female 11.7
Sample B Female 9.7
Sample C Male 12.5
Sample D Male 7.6
Subiculum
nTPM: 8.7
Samples: 4

Max nTPM: 10.4
Min nTPM: 5.6
Sample A Female 10.4
Sample B Female 5.6
Sample C Male 8.5
Sample D Male 10.4
Ventral hippocampus
nTPM: 8.7
Samples: 4

Max nTPM: 13.7
Min nTPM: 6.4
Sample A Female 6.4
Sample B Female 6.4
Sample C Male 13.7
Sample D Male 8.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.5
Samples: 4

Max nTPM: 23.5
Min nTPM: 16.9
Sample A Male 16.9
Sample B Male 20.8
Sample C Female 20.6
Sample D Female 23.5
Hippocampal formation
nTPM: 15.9
Samples: 4

Max nTPM: 20.0
Min nTPM: 14.2
Sample A Male 14.3
Sample B Male 14.9
Sample C Female 14.2
Sample D Female 20.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
69095957 Antisense, RP_050324_02_E06, Mouse strain C57BL/6J (56 days, male) 1.6
75145997 Antisense, RP_060220_02_B03, Mouse strain C57BL/6J (56 days, male) 1.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.