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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:122.4 nTPM
HPA:122.4 nTPM
GTEx:150.9 nTPM
FANTOM5:105.9 Scaled Tags Per Million
Pig:76.4 nTPM
Mouse:95.0 nTPM
Allen mouse:7.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041605Antibody HPA043576Antibody CAB034345
Glial cells LowNot detectedNot detected
Neuronal cells MediumLowNot detected






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 122.4
Sample id Sample description nTPM
Hippocampus
nTPM: 122.0
1898 Male, age 80, left hemisphere 129.1
2529 Female, age 94, left hemisphere 128.7
2148 Female, age 91, left hemisphere 120.7
1911 Female, age 85, right hemisphere 118.2
1855 Male, age 76, left hemisphere 117.9
2621 Female, age 67, right hemisphere 117.6
Dentate gyrus
nTPM: 122.4
2528 Male, age 74, both hemispheres 134.0
2530 Female, age 94, left hemisphere 133.2
2246 Female, age 85, both hemispheres 119.1
2010 Male, age 76, both hemispheres 118.0
1927 Female, age 91, both hemispheres 116.1
2531 Female, age 67, both hemispheres 113.8
Entorhinal gyrus
nTPM: 119.7
2117 Female, age 91, right hemisphere 132.5
2764 Male, age 80, right hemisphere 126.9
1938 Female, age 85, left hemisphere 118.4
1787 Male, age 76, left hemisphere 118.2
2613 Female, age 94, left hemisphere 114.5
2686 Male, age 75, right hemisphere 107.7
Hippocampus, CA1
nTPM: 120.7
2749 Male, age 80, left hemisphere 129.3
2527 Male, age 74, both hemispheres 123.3
1873 Female, age 85, both hemispheres 121.0
2082 Female, age 91, right hemisphere 117.8
2045 Male, age 76, both hemispheres 112.1
Hippocampus, CA2
nTPM: 122.3
2249 Male, age 74, both hemispheres 129.6
1963 Male, age 80, left hemisphere 128.8
2437 Female, age 94, left hemisphere 122.7
2113 Female, age 91, right hemisphere 118.8
1940 Female, age 85, left hemisphere 117.1
1892 Male, age 76, both hemispheres 116.7
Hippocampus, CA3
nTPM: 119.0
2436 Male, age 74, both hemispheres 126.8
2137 Male, age 80, left hemisphere 121.4
2620 Female, age 94, left hemisphere 118.4
2861 Female, age 67, both hemispheres 116.7
1891 Female, age 85, both hemispheres 115.5
1867 Male, age 76, both hemispheres 114.9
Parahippocampal cortex
nTPM: 114.8
2245 Female, age 91, both hemispheres 121.7
2250 Female, age 67, right hemisphere 119.6
1990 Female, age 91, right hemisphere 119.1
1933 Female, age 85, both hemispheres 119.0
1850 Male, age 80, both hemispheres 114.9
2532 Female, age 72, left hemisphere 114.9
2018 Male, age 76, both hemispheres 111.2
2692 Male, age 74, both hemispheres 110.6
2622 Female, age 67, right hemisphere 110.1
2693 Female, age 94, both hemispheres 106.7
Perirhinal gyrus
nTPM: 118.7
1794 Male, age 80, right hemisphere 126.6
1847 Female, age 91, left hemisphere 122.4
2521 Female, age 94, right hemisphere 120.2
1841 Female, age 85, right hemisphere 115.0
2848 Male, age 76, right hemisphere 109.3
Subiculum
nTPM: 118.3
1977 Female, age 85, both hemispheres 122.8
2619 Male, age 74, both hemispheres 121.6
2729 Female, age 91, right hemisphere 119.9
1901 Male, age 80, both hemispheres 118.6
2438 Female, age 94, left hemisphere 115.1
2042 Male, age 76, both hemispheres 112.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 150.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 150.9
Samples: 197

Max nTPM: 246.7
Min nTPM: 57.9
Std nTPM: 29.7
Median nTPM: 147.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 246.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 228.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 225.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 222.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 220.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 217.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 216.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 211.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 210.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 204.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 201.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 105.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 105.9
FF:10153-102I9 76 years, female 117.8
FF:10169-103B7 60 years, female 94.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 76.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 76.4
Samples: 4

Max nTPM: 100.6
Min nTPM: 58.7
Sample A Female 100.6
Sample B Female 69.9
Sample C Male 76.3
Sample D Male 58.7
Entorhinal cortex
nTPM: 59.5
Samples: 4

Max nTPM: 64.1
Min nTPM: 52.8
Sample A Female 64.1
Sample B Female 61.4
Sample C Male 59.7
Sample D Male 52.8
Subiculum
nTPM: 60.3
Samples: 4

Max nTPM: 73.7
Min nTPM: 53.7
Sample A Female 73.7
Sample B Female 56.6
Sample C Male 57.2
Sample D Male 53.7
Ventral hippocampus
nTPM: 71.3
Samples: 4

Max nTPM: 87.4
Min nTPM: 49.7
Sample A Female 70.0
Sample B Female 49.7
Sample C Male 87.4
Sample D Male 78.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 95.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 90.5
Samples: 4

Max nTPM: 96.7
Min nTPM: 84.5
Sample A Male 84.5
Sample B Male 93.0
Sample C Female 96.7
Sample D Female 87.6
Hippocampal formation
nTPM: 95.0
Samples: 4

Max nTPM: 102.2
Min nTPM: 84.5
Sample A Male 102.2
Sample B Male 91.7
Sample C Female 84.5
Sample D Female 101.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.9
68269664 Antisense, RP_041129_02_A05, Mouse strain C57BL/6J (56 days, male) 7.9

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The Human Protein Atlas

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