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HAMP
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:17.8 nTPM
HPA:17.8 nTPM
GTEx:17.2 nTPM
FANTOM5:202.2 Scaled Tags Per Million
Pig:0.2 nTPM
Mouse:0.0 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.8
Sample id Sample description nTPM
Hippocampus
nTPM: 17.5
1855 Male, age 76, left hemisphere 18.7
1911 Female, age 85, right hemisphere 18.6
1898 Male, age 80, left hemisphere 18.0
2621 Female, age 67, right hemisphere 17.9
2529 Female, age 94, left hemisphere 16.2
2148 Female, age 91, left hemisphere 15.4
Dentate gyrus
nTPM: 16.6
2010 Male, age 76, both hemispheres 17.8
2531 Female, age 67, both hemispheres 17.5
2246 Female, age 85, both hemispheres 16.2
2530 Female, age 94, left hemisphere 16.1
1927 Female, age 91, both hemispheres 16.0
2528 Male, age 74, both hemispheres 16.0
Entorhinal gyrus
nTPM: 15.9
1787 Male, age 76, left hemisphere 17.0
2117 Female, age 91, right hemisphere 16.7
2613 Female, age 94, left hemisphere 15.6
2764 Male, age 80, right hemisphere 15.6
1938 Female, age 85, left hemisphere 15.5
2686 Male, age 75, right hemisphere 14.9
Hippocampus, CA1
nTPM: 17.0
2045 Male, age 76, both hemispheres 21.0
1873 Female, age 85, both hemispheres 17.3
2527 Male, age 74, both hemispheres 16.4
2082 Female, age 91, right hemisphere 15.9
2749 Male, age 80, left hemisphere 14.2
Hippocampus, CA2
nTPM: 16.5
1940 Female, age 85, left hemisphere 20.7
2437 Female, age 94, left hemisphere 16.2
1892 Male, age 76, both hemispheres 16.0
2113 Female, age 91, right hemisphere 15.8
2249 Male, age 74, both hemispheres 15.2
1963 Male, age 80, left hemisphere 14.8
Hippocampus, CA3
nTPM: 15.7
1891 Female, age 85, both hemispheres 16.4
2861 Female, age 67, both hemispheres 16.1
2436 Male, age 74, both hemispheres 16.0
1867 Male, age 76, both hemispheres 15.7
2620 Female, age 94, left hemisphere 15.4
2137 Male, age 80, left hemisphere 14.4
Parahippocampal cortex
nTPM: 17.8
2250 Female, age 67, right hemisphere 26.2
2018 Male, age 76, both hemispheres 24.5
2693 Female, age 94, both hemispheres 16.5
2532 Female, age 72, left hemisphere 16.2
2622 Female, age 67, right hemisphere 16.0
1990 Female, age 91, right hemisphere 15.8
2245 Female, age 91, both hemispheres 15.8
2692 Male, age 74, both hemispheres 15.8
1850 Male, age 80, both hemispheres 15.7
1933 Female, age 85, both hemispheres 15.2
Perirhinal gyrus
nTPM: 16.0
2521 Female, age 94, right hemisphere 16.5
1841 Female, age 85, right hemisphere 16.3
1794 Male, age 80, right hemisphere 16.2
2848 Male, age 76, right hemisphere 15.7
1847 Female, age 91, left hemisphere 15.5
Subiculum
nTPM: 16.8
2042 Male, age 76, both hemispheres 19.7
2619 Male, age 74, both hemispheres 17.2
2438 Female, age 94, left hemisphere 16.9
2729 Female, age 91, right hemisphere 16.3
1901 Male, age 80, both hemispheres 15.6
1977 Female, age 85, both hemispheres 15.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.2
Samples: 197

Max nTPM: 292.2
Min nTPM: 0.4
Std nTPM: 34.0
Median nTPM: 4.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 292.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 184.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 155.9
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 138.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 137.6
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 123.4
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 97.4
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 88.3
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 68.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 68.0
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 67.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 202.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 202.2
FF:10169-103B7 60 years, female 374.5
FF:10153-102I9 76 years, female 29.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 0.2
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.1
Sample A Female 0.1
Sample B Female 0.1
Sample C Male 0.2
Sample D Male 0.2
Entorhinal cortex
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.0
Sample A Female 0.2
Sample B Female 0.1
Sample C Male 0.1
Sample D Male 0.0
Subiculum
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.1
Sample A Female 0.1
Sample B Female 0.1
Sample C Male 0.2
Sample D Male 0.1
Ventral hippocampus
nTPM: 0.2
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.1
Sample A Female 0.2
Sample B Female 0.1
Sample C Male 0.2
Sample D Male 0.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0
Hippocampal formation
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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