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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:181.0 nTPM
HPA:181.0 nTPM
GTEx:204.8 nTPM
FANTOM5:173.1 Scaled Tags Per Million
Pig:70.5 nTPM
Mouse:6.7 nTPM
Allen mouse:6.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 181.0
Sample id Sample description nTPM
Hippocampus
nTPM: 181.0
2529 Female, age 94, left hemisphere 190.3
2148 Female, age 91, left hemisphere 185.0
2621 Female, age 67, right hemisphere 181.8
1911 Female, age 85, right hemisphere 178.2
1898 Male, age 80, left hemisphere 176.4
1855 Male, age 76, left hemisphere 174.2
Dentate gyrus
nTPM: 175.0
2530 Female, age 94, left hemisphere 192.0
2531 Female, age 67, both hemispheres 179.1
1927 Female, age 91, both hemispheres 178.1
2528 Male, age 74, both hemispheres 169.5
2010 Male, age 76, both hemispheres 165.9
2246 Female, age 85, both hemispheres 165.1
Entorhinal gyrus
nTPM: 172.3
2117 Female, age 91, right hemisphere 183.7
2613 Female, age 94, left hemisphere 174.4
2686 Male, age 75, right hemisphere 171.1
2764 Male, age 80, right hemisphere 170.2
1787 Male, age 76, left hemisphere 169.5
1938 Female, age 85, left hemisphere 164.9
Hippocampus, CA1
nTPM: 171.8
2082 Female, age 91, right hemisphere 176.3
2749 Male, age 80, left hemisphere 173.8
2527 Male, age 74, both hemispheres 172.9
1873 Female, age 85, both hemispheres 168.3
2045 Male, age 76, both hemispheres 167.8
Hippocampus, CA2
nTPM: 172.9
1963 Male, age 80, left hemisphere 178.6
2437 Female, age 94, left hemisphere 178.5
2113 Female, age 91, right hemisphere 175.9
1940 Female, age 85, left hemisphere 173.7
1892 Male, age 76, both hemispheres 167.6
2249 Male, age 74, both hemispheres 163.0
Hippocampus, CA3
nTPM: 175.7
2861 Female, age 67, both hemispheres 196.8
2620 Female, age 94, left hemisphere 183.0
1891 Female, age 85, both hemispheres 173.1
1867 Male, age 76, both hemispheres 172.0
2137 Male, age 80, left hemisphere 169.8
2436 Male, age 74, both hemispheres 159.6
Parahippocampal cortex
nTPM: 169.1
2245 Female, age 91, both hemispheres 182.1
2692 Male, age 74, both hemispheres 174.2
2622 Female, age 67, right hemisphere 174.1
2532 Female, age 72, left hemisphere 170.4
2250 Female, age 67, right hemisphere 170.2
2018 Male, age 76, both hemispheres 169.7
1990 Female, age 91, right hemisphere 166.7
1850 Male, age 80, both hemispheres 162.8
2693 Female, age 94, both hemispheres 162.7
1933 Female, age 85, both hemispheres 158.1
Perirhinal gyrus
nTPM: 165.2
1794 Male, age 80, right hemisphere 169.9
2521 Female, age 94, right hemisphere 167.3
1847 Female, age 91, left hemisphere 165.0
2848 Male, age 76, right hemisphere 163.6
1841 Female, age 85, right hemisphere 160.4
Subiculum
nTPM: 175.2
2438 Female, age 94, left hemisphere 184.5
2619 Male, age 74, both hemispheres 177.2
2729 Female, age 91, right hemisphere 175.1
1901 Male, age 80, both hemispheres 174.4
1977 Female, age 85, both hemispheres 170.4
2042 Male, age 76, both hemispheres 169.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 204.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 204.8
Samples: 197

Max nTPM: 326.2
Min nTPM: 70.5
Std nTPM: 42.8
Median nTPM: 200.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 326.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 316.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 316.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 314.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 314.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 309.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 299.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 291.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 290.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 287.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 284.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 173.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 173.1
FF:10153-102I9 76 years, female 205.0
FF:10169-103B7 60 years, female 141.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 70.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 69.1
Samples: 4

Max nTPM: 84.2
Min nTPM: 50.2
Sample A Female 84.2
Sample B Female 60.8
Sample C Male 81.2
Sample D Male 50.2
Entorhinal cortex
nTPM: 70.5
Samples: 4

Max nTPM: 76.9
Min nTPM: 61.4
Sample A Female 67.4
Sample B Female 76.9
Sample C Male 76.1
Sample D Male 61.4
Subiculum
nTPM: 60.7
Samples: 4

Max nTPM: 78.9
Min nTPM: 53.1
Sample A Female 78.9
Sample B Female 55.7
Sample C Male 53.1
Sample D Male 54.9
Ventral hippocampus
nTPM: 63.8
Samples: 4

Max nTPM: 79.7
Min nTPM: 49.0
Sample A Female 61.2
Sample B Female 49.0
Sample C Male 79.7
Sample D Male 65.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.2
Samples: 4

Max nTPM: 9.0
Min nTPM: 1.9
Sample A Male 6.3
Sample B Male 9.0
Sample C Female 1.9
Sample D Female 3.7
Hippocampal formation
nTPM: 6.7
Samples: 4

Max nTPM: 11.0
Min nTPM: 3.4
Sample A Male 7.3
Sample B Male 4.9
Sample C Female 3.4
Sample D Female 11.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.9
79544866 Antisense, RP_071101_01_A12, Mouse strain C57BL/6J (56 days, male) 6.9

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The Human Protein Atlas

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