Brain tissue expression of USF2 in retina

RETINA - Expression summary

Protein expressionⁱ

No data

RNA expressionⁱ

Consensus:	90.4	nTPM
GTEx:	90.4	nTPM
FANTOM5:	116.6	Scaled Tags Per Million

Pig:	53.1	nTPM
Mouse:	9.3	nTPM

RETINA - Annotated protein expression
Pending normal tissue analysis

RETINA - GTEx RNA-seqⁱ

Average nTPM	90.4

GTEx sample id

Sample description

nTPM

Retina
Average nTPM: 90.4

Samples: 105

Max nTPM: 190.3
Min nTPM: 20.7
Std nTPM: 34.2
Median nTPM:

218_1	71 years, female	190.3
237_1	82 years, male	173.7
379_1	60 years, male	151.2
452_1	88 years, female	147.4
394_1	75 years, female	140.3
243_1	75 years, male	138.8
506_1	65 years, male	135.5
177_1	74 years, male	135.3
354_1	81 years, female	135.1
349_1	83 years, male	135.0
173_1	67 years, male	133.8
375_1	74 years, female	130.9
350_1	84 years, female	129.8
163_1	78 years, male	128.5
352_1	62 years, male	128.2
319_1	81 years, male	126.2
264_1	73 years, female	125.0
351_1	91 years, male	124.7
335_1	73 years, female	123.8
172_1	72 years, female	122.9
447_1	81 years, male	122.2
406_1	79 years, male	121.8
425_1	59 years, female	121.7
386_1	76 years, male	120.1
376_1	75 years, female	120.0
384_1	83 years, male	119.6
295_1	61 years, female	116.2
292_1	71 years, male	116.0
189_1	76 years, male	114.9
356_1	87 years, female	114.3
377_1	82 years, female	114.3
347_1	72 years, male	112.6
480_1	63 years, male	111.1
355_1	70 years, female	110.8
321_1	62 years, female	109.7
293_1	68 years, female	108.4
317_1	60 years, male	106.1
320_1	89 years, female	105.6
286_1	68 years, female	104.9
353_1	82 years, female	103.7
318_1	68 years, male	102.6
229_1	69 years, female	102.3
526_1	61 years, male	102.1
389_1	86 years, female	99.7
404_1	82 years, female	98.8
307_1	66 years, female	96.6
405_1	91 years, male	96.2
246_1	77 years, male	95.7
291_1	76 years, male	94.3
316_1	62 years, male	94.2
254_1	77 years, female	92.2
322_1	76 years, male	91.7
251_1	78 years, male	91.6
265_1	87 years, male	90.8
503_1	68 years, male	90.1
41_1	94 years, female	89.8
348_1	84 years, male	89.4
266_1	85 years, male	84.6
313_1	79 years, female	84.1
396_1	62 years, male	82.9
311_1	78 years, male	82.8
517_1	88 years, male	81.9
99_1	64 years, male	81.8
314_1	67 years, male	80.4
35_1	74 years, female	79.2
288_1	66 years, female	78.2
137_1	83 years, male	74.9
499_1	55 years, female	74.3
324_1	76 years, male	73.3
468_1	89 years, male	73.0
6_1	73 years, female	72.8
217_1	76 years, male	70.9
17_1	71 years, male	68.6
42_1	85 years, male	67.1
518_1	75 years, female	66.8
145_1	84 years, male	66.1
2_1	77 years, female	65.9
315_1	62 years, female	65.8
115_1	83 years, male	62.5
117_1	61 years, male	61.6
4_1	88 years, female	60.4
120_1	70 years, female	59.6
308_1	70 years, female	59.0
18_1	88 years, male	58.8
9_1	66 years, female	57.9
153_1	70 years, female	57.5
109_1	81 years, female	54.8
126_1	63 years, male	54.1
495_1	57 years, female	53.8
415_1	77 years, female	53.5
501_1	88 years, male	53.3
81_1	67 years, male	53.0
32_1	67 years, male	48.0
466_1	57 years, female	46.3
142_1	61 years, female	42.7
119_1	70 years, female	42.1
162_1	79 years, female	40.0
43_1	64 years, female	39.6
139_1	64 years, female	38.3
414_1	84 years, female	38.0
89_1	63 years, male	33.3
490_1	67 years, female	32.5
413_1	59 years, female	26.5
149_1	88 years, male	22.3
491_1	89 years, female	20.7
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RETINA - FANTOM5 CAGEⁱ

Max Scaled Tags Per Million	116.6

FANTOM5 sample id

Sample description

Scaled Tags Per Million

Retina
Scaled Tags Per Million: 116.6

FF:10030-101E3

24-65 years, mixed

116.6

RETINA - Pig RNA-seqⁱ

Average nTPM	53.1

Pig sample

Sample description

nTPM

Retina
nTPM: 53.1

Samples: 4

Max nTPM: 63.7
Min nTPM: 48.4

Sample A	Female	49.6
Sample B	Female	50.5
Sample C	Male	63.7
Sample D	Male	48.4

RETINA - Mouse RNA-seqⁱ

Average nTPM	9.3

Mouse sample

Sample description

nTPM

Retina
nTPM: 9.3

Samples: 4

Max nTPM: 17.2
Min nTPM: 5.7

Sample A	Male	7.9
Sample B	Male	6.3
Sample C	Female	17.2
Sample D	Female	5.7