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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:45.0 nTPM
HPA:45.0 nTPM
GTEx:71.1 nTPM
FANTOM5:32.4 Scaled Tags Per Million
Pig:108.7 nTPM
Mouse:320.3 nTPM
Allen mouse:23.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.0
Sample id Sample description nTPM
Hippocampus
nTPM: 36.4
1898 Male, age 80, left hemisphere 48.8
2148 Female, age 91, left hemisphere 44.6
2621 Female, age 67, right hemisphere 43.5
1855 Male, age 76, left hemisphere 32.6
2529 Female, age 94, left hemisphere 25.6
1911 Female, age 85, right hemisphere 23.0
Dentate gyrus
nTPM: 45.0
2530 Female, age 94, left hemisphere 74.8
1927 Female, age 91, both hemispheres 55.7
2531 Female, age 67, both hemispheres 40.8
2010 Male, age 76, both hemispheres 38.5
2528 Male, age 74, both hemispheres 31.5
2246 Female, age 85, both hemispheres 28.5
Entorhinal gyrus
nTPM: 23.6
2764 Male, age 80, right hemisphere 26.9
2117 Female, age 91, right hemisphere 25.3
1787 Male, age 76, left hemisphere 25.1
2686 Male, age 75, right hemisphere 24.1
1938 Female, age 85, left hemisphere 20.3
2613 Female, age 94, left hemisphere 20.2
Hippocampus, CA1
nTPM: 35.2
2749 Male, age 80, left hemisphere 56.8
1873 Female, age 85, both hemispheres 36.2
2045 Male, age 76, both hemispheres 32.8
2082 Female, age 91, right hemisphere 26.9
2527 Male, age 74, both hemispheres 23.3
Hippocampus, CA2
nTPM: 38.9
2437 Female, age 94, left hemisphere 71.7
1892 Male, age 76, both hemispheres 56.1
1963 Male, age 80, left hemisphere 33.8
1940 Female, age 85, left hemisphere 31.4
2113 Female, age 91, right hemisphere 21.3
2249 Male, age 74, both hemispheres 19.1
Hippocampus, CA3
nTPM: 43.6
2620 Female, age 94, left hemisphere 63.5
2861 Female, age 67, both hemispheres 58.0
1867 Male, age 76, both hemispheres 54.1
2137 Male, age 80, left hemisphere 42.1
1891 Female, age 85, both hemispheres 27.5
2436 Male, age 74, both hemispheres 16.5
Parahippocampal cortex
nTPM: 28.2
2622 Female, age 67, right hemisphere 39.6
2693 Female, age 94, both hemispheres 34.0
1990 Female, age 91, right hemisphere 32.2
2245 Female, age 91, both hemispheres 31.4
2250 Female, age 67, right hemisphere 28.9
2532 Female, age 72, left hemisphere 27.2
2018 Male, age 76, both hemispheres 26.1
2692 Male, age 74, both hemispheres 24.1
1850 Male, age 80, both hemispheres 20.3
1933 Female, age 85, both hemispheres 18.6
Perirhinal gyrus
nTPM: 25.1
1794 Male, age 80, right hemisphere 31.3
2521 Female, age 94, right hemisphere 30.4
1841 Female, age 85, right hemisphere 24.4
1847 Female, age 91, left hemisphere 21.7
2848 Male, age 76, right hemisphere 17.7
Subiculum
nTPM: 34.3
2438 Female, age 94, left hemisphere 43.5
1901 Male, age 80, both hemispheres 40.1
2619 Male, age 74, both hemispheres 35.0
1977 Female, age 85, both hemispheres 30.9
2729 Female, age 91, right hemisphere 28.6
2042 Male, age 76, both hemispheres 27.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 71.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 71.1
Samples: 197

Max nTPM: 274.5
Min nTPM: 17.0
Std nTPM: 43.4
Median nTPM: 61.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 274.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 234.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 211.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 210.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 209.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 200.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 196.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 191.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 181.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 159.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 157.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.4
FF:10169-103B7 60 years, female 43.9
FF:10153-102I9 76 years, female 20.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 108.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 35.1
Samples: 4

Max nTPM: 52.3
Min nTPM: 26.4
Sample A Female 34.3
Sample B Female 26.4
Sample C Male 52.3
Sample D Male 27.3
Entorhinal cortex
nTPM: 108.7
Samples: 4

Max nTPM: 167.9
Min nTPM: 62.6
Sample A Female 108.5
Sample B Female 167.9
Sample C Male 62.6
Sample D Male 95.6
Subiculum
nTPM: 29.9
Samples: 4

Max nTPM: 50.4
Min nTPM: 20.1
Sample A Female 50.4
Sample B Female 20.1
Sample C Male 27.9
Sample D Male 21.3
Ventral hippocampus
nTPM: 31.3
Samples: 4

Max nTPM: 43.1
Min nTPM: 17.0
Sample A Female 40.3
Sample B Female 17.0
Sample C Male 43.1
Sample D Male 24.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 320.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 288.1
Samples: 4

Max nTPM: 331.9
Min nTPM: 244.8
Sample A Male 331.9
Sample B Male 312.9
Sample C Female 262.8
Sample D Female 244.8
Hippocampal formation
nTPM: 320.3
Samples: 4

Max nTPM: 351.3
Min nTPM: 278.3
Sample A Male 278.3
Sample B Male 334.3
Sample C Female 351.3
Sample D Female 317.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.8
77454673 Antisense, RP_070129_01_C06, Mouse strain C57BL/6J (56 days, male) 23.8

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