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PMPCB
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:18.8 nTPM
HPA:18.8 nTPM
GTEx:19.8 nTPM
FANTOM5:111.3 Scaled Tags Per Million
Pig:23.1 nTPM
Mouse:65.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040674
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.8
Sample id Sample description nTPM
Hippocampus
nTPM: 14.9
1898 Male, age 80, left hemisphere 16.4
1855 Male, age 76, left hemisphere 15.1
1911 Female, age 85, right hemisphere 14.7
2621 Female, age 67, right hemisphere 14.7
2148 Female, age 91, left hemisphere 14.5
2529 Female, age 94, left hemisphere 14.3
Dentate gyrus
nTPM: 15.0
2010 Male, age 76, both hemispheres 16.0
1927 Female, age 91, both hemispheres 15.8
2528 Male, age 74, both hemispheres 15.8
2246 Female, age 85, both hemispheres 14.8
2530 Female, age 94, left hemisphere 14.0
2531 Female, age 67, both hemispheres 13.5
Entorhinal gyrus
nTPM: 15.8
1938 Female, age 85, left hemisphere 17.1
2764 Male, age 80, right hemisphere 16.8
1787 Male, age 76, left hemisphere 16.6
2117 Female, age 91, right hemisphere 15.2
2613 Female, age 94, left hemisphere 14.6
2686 Male, age 75, right hemisphere 14.4
Hippocampus, CA1
nTPM: 15.5
1873 Female, age 85, both hemispheres 16.6
2527 Male, age 74, both hemispheres 16.2
2749 Male, age 80, left hemisphere 16.0
2082 Female, age 91, right hemisphere 15.0
2045 Male, age 76, both hemispheres 13.8
Hippocampus, CA2
nTPM: 15.6
1892 Male, age 76, both hemispheres 17.8
1963 Male, age 80, left hemisphere 15.5
2249 Male, age 74, both hemispheres 15.4
1940 Female, age 85, left hemisphere 15.3
2113 Female, age 91, right hemisphere 15.0
2437 Female, age 94, left hemisphere 14.5
Hippocampus, CA3
nTPM: 15.3
2436 Male, age 74, both hemispheres 18.0
1891 Female, age 85, both hemispheres 16.5
2137 Male, age 80, left hemisphere 15.3
1867 Male, age 76, both hemispheres 15.2
2620 Female, age 94, left hemisphere 14.4
2861 Female, age 67, both hemispheres 12.5
Parahippocampal cortex
nTPM: 16.3
1850 Male, age 80, both hemispheres 20.4
1933 Female, age 85, both hemispheres 17.0
1990 Female, age 91, right hemisphere 17.0
2693 Female, age 94, both hemispheres 17.0
2018 Male, age 76, both hemispheres 15.7
2250 Female, age 67, right hemisphere 15.7
2692 Male, age 74, both hemispheres 15.6
2622 Female, age 67, right hemisphere 15.0
2245 Female, age 91, both hemispheres 14.8
2532 Female, age 72, left hemisphere 14.7
Perirhinal gyrus
nTPM: 18.8
1794 Male, age 80, right hemisphere 21.1
1841 Female, age 85, right hemisphere 20.1
1847 Female, age 91, left hemisphere 19.2
2848 Male, age 76, right hemisphere 17.7
2521 Female, age 94, right hemisphere 15.8
Subiculum
nTPM: 16.0
2438 Female, age 94, left hemisphere 17.2
1977 Female, age 85, both hemispheres 16.8
2619 Male, age 74, both hemispheres 16.2
1901 Male, age 80, both hemispheres 15.7
2729 Female, age 91, right hemisphere 15.4
2042 Male, age 76, both hemispheres 14.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.8
Samples: 197

Max nTPM: 40.3
Min nTPM: 14.4
Std nTPM: 3.5
Median nTPM: 19.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 40.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 30.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 30.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 29.0
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 28.7
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 27.7
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 27.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 26.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 25.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 25.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 25.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 111.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 111.3
FF:10153-102I9 76 years, female 121.2
FF:10169-103B7 60 years, female 101.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.1
Samples: 4

Max nTPM: 28.7
Min nTPM: 17.9
Sample A Female 28.7
Sample B Female 21.4
Sample C Male 24.2
Sample D Male 17.9
Entorhinal cortex
nTPM: 23.0
Samples: 4

Max nTPM: 29.2
Min nTPM: 17.8
Sample A Female 23.8
Sample B Female 29.2
Sample C Male 21.2
Sample D Male 17.8
Subiculum
nTPM: 21.3
Samples: 4

Max nTPM: 28.5
Min nTPM: 17.0
Sample A Female 28.5
Sample B Female 21.4
Sample C Male 18.3
Sample D Male 17.0
Ventral hippocampus
nTPM: 20.3
Samples: 4

Max nTPM: 22.2
Min nTPM: 18.4
Sample A Female 22.2
Sample B Female 18.4
Sample C Male 20.6
Sample D Male 20.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.4
Samples: 4

Max nTPM: 60.5
Min nTPM: 52.1
Sample A Male 53.4
Sample B Male 60.5
Sample C Female 59.5
Sample D Female 52.1
Hippocampal formation
nTPM: 65.0
Samples: 4

Max nTPM: 70.6
Min nTPM: 61.7
Sample A Male 70.6
Sample B Male 61.7
Sample C Female 61.7
Sample D Female 66.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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