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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:192.1 nTPM
HPA:192.1 nTPM
GTEx:133.2 nTPM
FANTOM5:317.8 Scaled Tags Per Million
Pig:55.7 nTPM
Mouse:56.5 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029193Antibody CAB025430
Glial cells MediumHigh
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 192.1
Sample id Sample description nTPM
Hippocampus
nTPM: 190.6
1911 Female, age 85, right hemisphere 202.5
2529 Female, age 94, left hemisphere 199.2
1855 Male, age 76, left hemisphere 190.3
2148 Female, age 91, left hemisphere 189.4
1898 Male, age 80, left hemisphere 183.1
2621 Female, age 67, right hemisphere 179.3
Dentate gyrus
nTPM: 181.2
2246 Female, age 85, both hemispheres 195.5
2528 Male, age 74, both hemispheres 192.7
2010 Male, age 76, both hemispheres 184.5
1927 Female, age 91, both hemispheres 177.2
2530 Female, age 94, left hemisphere 171.6
2531 Female, age 67, both hemispheres 165.8
Entorhinal gyrus
nTPM: 178.6
2117 Female, age 91, right hemisphere 200.0
1938 Female, age 85, left hemisphere 186.2
1787 Male, age 76, left hemisphere 182.9
2764 Male, age 80, right hemisphere 170.0
2686 Male, age 75, right hemisphere 167.3
2613 Female, age 94, left hemisphere 165.1
Hippocampus, CA1
nTPM: 186.0
2527 Male, age 74, both hemispheres 205.2
1873 Female, age 85, both hemispheres 195.5
2082 Female, age 91, right hemisphere 187.7
2045 Male, age 76, both hemispheres 178.7
2749 Male, age 80, left hemisphere 162.9
Hippocampus, CA2
nTPM: 182.7
2113 Female, age 91, right hemisphere 194.7
2249 Male, age 74, both hemispheres 190.2
1940 Female, age 85, left hemisphere 187.2
1963 Male, age 80, left hemisphere 177.1
2437 Female, age 94, left hemisphere 176.6
1892 Male, age 76, both hemispheres 170.2
Hippocampus, CA3
nTPM: 179.9
1891 Female, age 85, both hemispheres 204.7
2436 Male, age 74, both hemispheres 186.3
1867 Male, age 76, both hemispheres 176.6
2861 Female, age 67, both hemispheres 173.5
2620 Female, age 94, left hemisphere 170.4
2137 Male, age 80, left hemisphere 167.7
Parahippocampal cortex
nTPM: 183.5
2692 Male, age 74, both hemispheres 200.6
2018 Male, age 76, both hemispheres 191.6
2250 Female, age 67, right hemisphere 191.1
1933 Female, age 85, both hemispheres 188.7
1990 Female, age 91, right hemisphere 182.8
1850 Male, age 80, both hemispheres 179.8
2622 Female, age 67, right hemisphere 177.3
2245 Female, age 91, both hemispheres 176.4
2693 Female, age 94, both hemispheres 174.2
2532 Female, age 72, left hemisphere 172.6
Perirhinal gyrus
nTPM: 178.5
1841 Female, age 85, right hemisphere 184.1
1847 Female, age 91, left hemisphere 180.5
2521 Female, age 94, right hemisphere 178.7
1794 Male, age 80, right hemisphere 176.6
2848 Male, age 76, right hemisphere 172.4
Subiculum
nTPM: 192.1
2729 Female, age 91, right hemisphere 204.2
2619 Male, age 74, both hemispheres 200.9
2438 Female, age 94, left hemisphere 195.3
2042 Male, age 76, both hemispheres 189.1
1977 Female, age 85, both hemispheres 183.6
1901 Male, age 80, both hemispheres 179.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 133.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 133.2
Samples: 197

Max nTPM: 301.5
Min nTPM: 43.1
Std nTPM: 46.7
Median nTPM: 129.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 301.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 293.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 275.9
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 252.3
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 244.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 243.7
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 233.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 233.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 231.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 229.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 226.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 317.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 317.8
FF:10153-102I9 76 years, female 415.8
FF:10169-103B7 60 years, female 219.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 55.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 49.5
Samples: 4

Max nTPM: 55.8
Min nTPM: 43.9
Sample A Female 55.8
Sample B Female 43.9
Sample C Male 53.1
Sample D Male 45.0
Entorhinal cortex
nTPM: 52.2
Samples: 4

Max nTPM: 65.8
Min nTPM: 39.0
Sample A Female 41.4
Sample B Female 65.8
Sample C Male 62.5
Sample D Male 39.0
Subiculum
nTPM: 55.7
Samples: 4

Max nTPM: 66.0
Min nTPM: 45.5
Sample A Female 66.0
Sample B Female 56.0
Sample C Male 45.5
Sample D Male 55.2
Ventral hippocampus
nTPM: 47.4
Samples: 4

Max nTPM: 49.3
Min nTPM: 43.5
Sample A Female 47.7
Sample B Female 49.3
Sample C Male 49.1
Sample D Male 43.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 56.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.5
Samples: 4

Max nTPM: 59.9
Min nTPM: 54.4
Sample A Male 59.9
Sample B Male 55.5
Sample C Female 56.1
Sample D Female 54.4
Hippocampal formation
nTPM: 48.3
Samples: 4

Max nTPM: 55.0
Min nTPM: 42.5
Sample A Male 55.0
Sample B Male 42.5
Sample C Female 43.0
Sample D Female 52.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68162244 Antisense, RP_041122_02_D10, Mouse strain C57BL/6J (56 days, male) 0.1

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