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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:91.1 nTPM
HPA:91.1 nTPM
GTEx:82.8 nTPM
FANTOM5:65.1 Scaled Tags Per Million
Mouse:40.7 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057236
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 91.1
Sample id Sample description nTPM
Hippocampus
nTPM: 84.1
2529 Female, age 94, left hemisphere 88.7
2148 Female, age 91, left hemisphere 88.0
1898 Male, age 80, left hemisphere 86.5
1911 Female, age 85, right hemisphere 84.4
2621 Female, age 67, right hemisphere 80.2
1855 Male, age 76, left hemisphere 76.7
Dentate gyrus
nTPM: 83.8
2530 Female, age 94, left hemisphere 89.9
1927 Female, age 91, both hemispheres 88.0
2528 Male, age 74, both hemispheres 85.7
2531 Female, age 67, both hemispheres 81.6
2246 Female, age 85, both hemispheres 79.1
2010 Male, age 76, both hemispheres 78.5
Entorhinal gyrus
nTPM: 89.6
2117 Female, age 91, right hemisphere 97.4
2686 Male, age 75, right hemisphere 94.8
1938 Female, age 85, left hemisphere 92.7
2764 Male, age 80, right hemisphere 88.2
2613 Female, age 94, left hemisphere 82.2
1787 Male, age 76, left hemisphere 82.1
Hippocampus, CA1
nTPM: 82.9
1873 Female, age 85, both hemispheres 85.8
2527 Male, age 74, both hemispheres 84.5
2045 Male, age 76, both hemispheres 82.1
2082 Female, age 91, right hemisphere 82.1
2749 Male, age 80, left hemisphere 79.8
Hippocampus, CA2
nTPM: 84.8
1963 Male, age 80, left hemisphere 92.8
2113 Female, age 91, right hemisphere 86.9
2437 Female, age 94, left hemisphere 84.5
2249 Male, age 74, both hemispheres 81.8
1940 Female, age 85, left hemisphere 81.5
1892 Male, age 76, both hemispheres 81.2
Hippocampus, CA3
nTPM: 81.2
1891 Female, age 85, both hemispheres 90.7
2137 Male, age 80, left hemisphere 83.5
2861 Female, age 67, both hemispheres 80.3
1867 Male, age 76, both hemispheres 79.0
2620 Female, age 94, left hemisphere 77.3
2436 Male, age 74, both hemispheres 76.6
Parahippocampal cortex
nTPM: 86.6
1850 Male, age 80, both hemispheres 97.1
1990 Female, age 91, right hemisphere 90.8
1933 Female, age 85, both hemispheres 89.4
2692 Male, age 74, both hemispheres 88.1
2250 Female, age 67, right hemisphere 84.7
2693 Female, age 94, both hemispheres 84.3
2018 Male, age 76, both hemispheres 83.8
2532 Female, age 72, left hemisphere 83.7
2245 Female, age 91, both hemispheres 83.3
2622 Female, age 67, right hemisphere 80.6
Perirhinal gyrus
nTPM: 91.1
1841 Female, age 85, right hemisphere 97.8
1794 Male, age 80, right hemisphere 95.7
2848 Male, age 76, right hemisphere 92.4
1847 Female, age 91, left hemisphere 89.8
2521 Female, age 94, right hemisphere 79.9
Subiculum
nTPM: 84.2
2729 Female, age 91, right hemisphere 90.2
1977 Female, age 85, both hemispheres 85.8
2619 Male, age 74, both hemispheres 82.7
2438 Female, age 94, left hemisphere 82.5
1901 Male, age 80, both hemispheres 82.0
2042 Male, age 76, both hemispheres 81.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 82.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 82.8
Samples: 197

Max nTPM: 141.9
Min nTPM: 54.1
Std nTPM: 16.7
Median nTPM: 81.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 141.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 140.4
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 132.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 127.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 127.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 121.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 120.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 116.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 113.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 112.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 112.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 65.1
FF:10153-102I9 76 years, female 77.9
FF:10169-103B7 60 years, female 52.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.1
Samples: 4

Max nTPM: 46.0
Min nTPM: 36.8
Sample A Male 38.1
Sample B Male 36.8
Sample C Female 46.0
Sample D Female 39.3
Hippocampal formation
nTPM: 40.7
Samples: 4

Max nTPM: 47.3
Min nTPM: 34.2
Sample A Male 42.8
Sample B Male 34.2
Sample C Female 47.3
Sample D Female 38.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
74821957 Antisense, RP_060321_02_F04, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.