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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:17.3 nTPM
HPA:17.3 nTPM
GTEx:14.9 nTPM
FANTOM5:33.3 Scaled Tags Per Million
Pig:8.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019515
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.3
Sample id Sample description nTPM
Hippocampus
nTPM: 15.9
2148 Female, age 91, left hemisphere 20.7
2529 Female, age 94, left hemisphere 17.6
1911 Female, age 85, right hemisphere 15.3
2621 Female, age 67, right hemisphere 14.8
1898 Male, age 80, left hemisphere 13.9
1855 Male, age 76, left hemisphere 13.1
Dentate gyrus
nTPM: 15.9
2531 Female, age 67, both hemispheres 18.8
1927 Female, age 91, both hemispheres 17.1
2246 Female, age 85, both hemispheres 16.4
2530 Female, age 94, left hemisphere 15.4
2528 Male, age 74, both hemispheres 14.7
2010 Male, age 76, both hemispheres 13.3
Entorhinal gyrus
nTPM: 16.1
2686 Male, age 75, right hemisphere 20.9
2764 Male, age 80, right hemisphere 17.6
2613 Female, age 94, left hemisphere 17.5
2117 Female, age 91, right hemisphere 14.2
1787 Male, age 76, left hemisphere 13.7
1938 Female, age 85, left hemisphere 12.7
Hippocampus, CA1
nTPM: 15.4
1873 Female, age 85, both hemispheres 16.7
2045 Male, age 76, both hemispheres 16.1
2082 Female, age 91, right hemisphere 15.9
2527 Male, age 74, both hemispheres 14.4
2749 Male, age 80, left hemisphere 13.8
Hippocampus, CA2
nTPM: 15.8
1963 Male, age 80, left hemisphere 20.3
2113 Female, age 91, right hemisphere 16.9
2437 Female, age 94, left hemisphere 16.9
1940 Female, age 85, left hemisphere 15.1
1892 Male, age 76, both hemispheres 14.5
2249 Male, age 74, both hemispheres 11.0
Hippocampus, CA3
nTPM: 17.3
2861 Female, age 67, both hemispheres 22.3
2620 Female, age 94, left hemisphere 21.1
2137 Male, age 80, left hemisphere 18.7
2436 Male, age 74, both hemispheres 14.8
1891 Female, age 85, both hemispheres 14.7
1867 Male, age 76, both hemispheres 12.2
Parahippocampal cortex
nTPM: 15.2
2622 Female, age 67, right hemisphere 20.3
2245 Female, age 91, both hemispheres 15.9
2692 Male, age 74, both hemispheres 15.3
2693 Female, age 94, both hemispheres 15.3
2018 Male, age 76, both hemispheres 15.1
1933 Female, age 85, both hemispheres 14.9
2250 Female, age 67, right hemisphere 14.4
2532 Female, age 72, left hemisphere 14.2
1990 Female, age 91, right hemisphere 13.7
1850 Male, age 80, both hemispheres 13.4
Perirhinal gyrus
nTPM: 14.3
2848 Male, age 76, right hemisphere 16.6
1794 Male, age 80, right hemisphere 14.7
1841 Female, age 85, right hemisphere 14.0
2521 Female, age 94, right hemisphere 13.5
1847 Female, age 91, left hemisphere 12.4
Subiculum
nTPM: 13.2
2729 Female, age 91, right hemisphere 15.6
2619 Male, age 74, both hemispheres 14.1
1901 Male, age 80, both hemispheres 13.7
1977 Female, age 85, both hemispheres 13.4
2438 Female, age 94, left hemisphere 12.2
2042 Male, age 76, both hemispheres 10.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.9
Samples: 197

Max nTPM: 30.2
Min nTPM: 6.1
Std nTPM: 3.6
Median nTPM: 14.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 30.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 26.6
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 26.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 24.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 23.6
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 23.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 22.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 22.0
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 21.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 21.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 21.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.3
FF:10169-103B7 60 years, female 35.5
FF:10153-102I9 76 years, female 31.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.7
Samples: 4

Max nTPM: 6.0
Min nTPM: 5.3
Sample A Female 5.7
Sample B Female 5.3
Sample C Male 6.0
Sample D Male 5.8
Entorhinal cortex
nTPM: 8.0
Samples: 4

Max nTPM: 8.3
Min nTPM: 7.7
Sample A Female 8.3
Sample B Female 8.1
Sample C Male 7.7
Sample D Male 7.7
Subiculum
nTPM: 7.3
Samples: 4

Max nTPM: 8.0
Min nTPM: 6.6
Sample A Female 8.0
Sample B Female 6.6
Sample C Male 7.7
Sample D Male 7.0
Ventral hippocampus
nTPM: 6.9
Samples: 4

Max nTPM: 8.9
Min nTPM: 5.9
Sample A Female 6.8
Sample B Female 6.1
Sample C Male 8.9
Sample D Male 5.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.