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NPTX2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:39.2 nTPM
HPA:39.2 nTPM
GTEx:29.6 nTPM
FANTOM5:19.0 Scaled Tags Per Million
Pig:15.8 nTPM
Mouse:24.8 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049799Antibody CAB020801
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.2
Sample id Sample description nTPM
Hippocampus
nTPM: 15.7
1898 Male, age 80, left hemisphere 25.6
2621 Female, age 67, right hemisphere 17.2
1855 Male, age 76, left hemisphere 16.1
2529 Female, age 94, left hemisphere 13.8
1911 Female, age 85, right hemisphere 13.6
2148 Female, age 91, left hemisphere 8.1
Dentate gyrus
nTPM: 20.2
2531 Female, age 67, both hemispheres 46.8
2528 Male, age 74, both hemispheres 19.2
2010 Male, age 76, both hemispheres 16.6
2246 Female, age 85, both hemispheres 16.6
2530 Female, age 94, left hemisphere 11.7
1927 Female, age 91, both hemispheres 10.5
Entorhinal gyrus
nTPM: 9.4
2764 Male, age 80, right hemisphere 16.7
2613 Female, age 94, left hemisphere 14.7
2686 Male, age 75, right hemisphere 11.0
2117 Female, age 91, right hemisphere 5.5
1787 Male, age 76, left hemisphere 4.8
1938 Female, age 85, left hemisphere 3.4
Hippocampus, CA1
nTPM: 28.2
2749 Male, age 80, left hemisphere 74.1
2045 Male, age 76, both hemispheres 31.4
1873 Female, age 85, both hemispheres 17.2
2527 Male, age 74, both hemispheres 12.2
2082 Female, age 91, right hemisphere 6.3
Hippocampus, CA2
nTPM: 12.7
1892 Male, age 76, both hemispheres 20.9
1963 Male, age 80, left hemisphere 15.0
1940 Female, age 85, left hemisphere 14.4
2249 Male, age 74, both hemispheres 11.0
2437 Female, age 94, left hemisphere 10.2
2113 Female, age 91, right hemisphere 4.4
Hippocampus, CA3
nTPM: 39.2
2137 Male, age 80, left hemisphere 75.7
2620 Female, age 94, left hemisphere 60.4
1867 Male, age 76, both hemispheres 48.6
2861 Female, age 67, both hemispheres 29.1
1891 Female, age 85, both hemispheres 12.6
2436 Male, age 74, both hemispheres 9.0
Parahippocampal cortex
nTPM: 10.8
2532 Female, age 72, left hemisphere 21.0
2693 Female, age 94, both hemispheres 15.4
2018 Male, age 76, both hemispheres 14.7
2250 Female, age 67, right hemisphere 10.6
1933 Female, age 85, both hemispheres 10.5
1850 Male, age 80, both hemispheres 9.7
2245 Female, age 91, both hemispheres 8.3
2622 Female, age 67, right hemisphere 8.1
1990 Female, age 91, right hemisphere 5.4
2692 Male, age 74, both hemispheres 4.0
Perirhinal gyrus
nTPM: 17.3
2521 Female, age 94, right hemisphere 46.4
1841 Female, age 85, right hemisphere 15.4
1794 Male, age 80, right hemisphere 11.2
1847 Female, age 91, left hemisphere 8.0
2848 Male, age 76, right hemisphere 5.3
Subiculum
nTPM: 14.3
1901 Male, age 80, both hemispheres 40.4
2042 Male, age 76, both hemispheres 23.6
1977 Female, age 85, both hemispheres 10.3
2729 Female, age 91, right hemisphere 4.2
2619 Male, age 74, both hemispheres 4.1
2438 Female, age 94, left hemisphere 3.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.6
Samples: 197

Max nTPM: 190.5
Min nTPM: 1.4
Std nTPM: 25.1
Median nTPM: 22.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 190.5
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 115.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 112.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 102.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 95.1
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 91.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 89.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 88.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 83.6
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 78.3
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 72.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.0
FF:10169-103B7 60 years, female 26.1
FF:10153-102I9 76 years, female 11.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.0
Samples: 4

Max nTPM: 14.4
Min nTPM: 6.9
Sample A Female 14.4
Sample B Female 11.3
Sample C Male 7.3
Sample D Male 6.9
Entorhinal cortex
nTPM: 15.8
Samples: 4

Max nTPM: 21.1
Min nTPM: 9.6
Sample A Female 21.1
Sample B Female 9.6
Sample C Male 16.7
Sample D Male 15.8
Subiculum
nTPM: 5.4
Samples: 4

Max nTPM: 9.2
Min nTPM: 3.1
Sample A Female 4.9
Sample B Female 4.3
Sample C Male 3.1
Sample D Male 9.2
Ventral hippocampus
nTPM: 7.1
Samples: 4

Max nTPM: 18.5
Min nTPM: 2.3
Sample A Female 2.3
Sample B Female 3.7
Sample C Male 3.9
Sample D Male 18.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.9
Samples: 4

Max nTPM: 27.3
Min nTPM: 12.9
Sample A Male 20.6
Sample B Male 27.3
Sample C Female 12.9
Sample D Female 22.6
Hippocampal formation
nTPM: 24.8
Samples: 4

Max nTPM: 33.3
Min nTPM: 19.3
Sample A Male 19.3
Sample B Male 25.3
Sample C Female 33.3
Sample D Female 21.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.