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PTPRZ1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Neuronal projections: Medium
Synapses: Low
RNA expressioni
Consensus:64.0 nTPM
HPA:64.0 nTPM
GTEx:46.0 nTPM
FANTOM5:731.2 Scaled Tags Per Million
Pig:125.5 nTPM
Mouse:104.6 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Extended tissue profilei , antibody HPA015103
Glial cells Not detected
Neuronal cells Medium
Neuronal projections Medium
Synapses Low

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015103
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.0
Sample id Sample description nTPM
Hippocampus
nTPM: 64.0
2529 Female, age 94, left hemisphere 71.7
1855 Male, age 76, left hemisphere 69.3
1911 Female, age 85, right hemisphere 69.2
2148 Female, age 91, left hemisphere 64.3
1898 Male, age 80, left hemisphere 59.7
2621 Female, age 67, right hemisphere 49.9
Dentate gyrus
nTPM: 56.0
2528 Male, age 74, both hemispheres 75.4
2246 Female, age 85, both hemispheres 61.9
1927 Female, age 91, both hemispheres 57.0
2010 Male, age 76, both hemispheres 50.7
2530 Female, age 94, left hemisphere 47.6
2531 Female, age 67, both hemispheres 43.3
Entorhinal gyrus
nTPM: 51.1
2117 Female, age 91, right hemisphere 67.8
1938 Female, age 85, left hemisphere 64.0
2686 Male, age 75, right hemisphere 51.2
1787 Male, age 76, left hemisphere 48.7
2613 Female, age 94, left hemisphere 38.3
2764 Male, age 80, right hemisphere 36.7
Hippocampus, CA1
nTPM: 60.9
2527 Male, age 74, both hemispheres 88.8
1873 Female, age 85, both hemispheres 61.8
2082 Female, age 91, right hemisphere 58.6
2045 Male, age 76, both hemispheres 53.2
2749 Male, age 80, left hemisphere 42.3
Hippocampus, CA2
nTPM: 57.6
2249 Male, age 74, both hemispheres 80.7
2113 Female, age 91, right hemisphere 64.4
1940 Female, age 85, left hemisphere 56.1
2437 Female, age 94, left hemisphere 55.5
1892 Male, age 76, both hemispheres 44.8
1963 Male, age 80, left hemisphere 44.4
Hippocampus, CA3
nTPM: 52.5
2436 Male, age 74, both hemispheres 69.8
1891 Female, age 85, both hemispheres 65.3
1867 Male, age 76, both hemispheres 52.6
2861 Female, age 67, both hemispheres 50.9
2137 Male, age 80, left hemisphere 45.5
2620 Female, age 94, left hemisphere 31.2
Parahippocampal cortex
nTPM: 57.1
2250 Female, age 67, right hemisphere 85.7
2692 Male, age 74, both hemispheres 69.0
1933 Female, age 85, both hemispheres 62.4
2693 Female, age 94, both hemispheres 59.1
2245 Female, age 91, both hemispheres 53.3
2018 Male, age 76, both hemispheres 52.6
1850 Male, age 80, both hemispheres 52.4
1990 Female, age 91, right hemisphere 52.2
2622 Female, age 67, right hemisphere 45.5
2532 Female, age 72, left hemisphere 38.6
Perirhinal gyrus
nTPM: 53.1
2521 Female, age 94, right hemisphere 59.2
1841 Female, age 85, right hemisphere 57.6
1847 Female, age 91, left hemisphere 57.4
1794 Male, age 80, right hemisphere 49.2
2848 Male, age 76, right hemisphere 42.3
Subiculum
nTPM: 55.5
2729 Female, age 91, right hemisphere 76.8
2438 Female, age 94, left hemisphere 54.6
1977 Female, age 85, both hemispheres 51.7
1901 Male, age 80, both hemispheres 51.3
2619 Male, age 74, both hemispheres 50.5
2042 Male, age 76, both hemispheres 48.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.0
Samples: 197

Max nTPM: 110.7
Min nTPM: 8.4
Std nTPM: 19.4
Median nTPM: 44.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 110.7
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 106.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 99.3
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 96.8
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 90.8
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 89.2
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 88.3
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 87.0
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 86.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 82.2
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 82.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 731.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 731.2
FF:10169-103B7 60 years, female 914.5
FF:10153-102I9 76 years, female 547.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 125.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 105.7
Samples: 4

Max nTPM: 121.1
Min nTPM: 91.3
Sample A Female 121.1
Sample B Female 98.5
Sample C Male 112.0
Sample D Male 91.3
Entorhinal cortex
nTPM: 86.1
Samples: 4

Max nTPM: 94.5
Min nTPM: 73.1
Sample A Female 94.3
Sample B Female 82.5
Sample C Male 94.5
Sample D Male 73.1
Subiculum
nTPM: 125.5
Samples: 4

Max nTPM: 140.5
Min nTPM: 100.3
Sample A Female 140.5
Sample B Female 130.8
Sample C Male 130.5
Sample D Male 100.3
Ventral hippocampus
nTPM: 118.9
Samples: 4

Max nTPM: 134.6
Min nTPM: 101.1
Sample A Female 122.2
Sample B Female 117.8
Sample C Male 134.6
Sample D Male 101.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 104.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 104.7
Samples: 4

Max nTPM: 119.2
Min nTPM: 86.9
Sample A Male 108.7
Sample B Male 86.9
Sample C Female 103.8
Sample D Female 119.2
Hippocampal formation
nTPM: 84.7
Samples: 4

Max nTPM: 94.1
Min nTPM: 74.5
Sample A Male 86.9
Sample B Male 94.1
Sample C Female 74.5
Sample D Female 83.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
77371825 Antisense, RP_070116_02_E06, Mouse strain C57BL/6J (56 days, male) 2.0
71487157 Antisense, RP_050913_01_D03, Mouse strain C57BL/6J (56 days, male) 0.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.