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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:136.9 nTPM
HPA:136.9 nTPM
GTEx:149.0 nTPM
FANTOM5:4.7 Scaled Tags Per Million
Pig:78.4 nTPM
Mouse:121.5 nTPM
Allen mouse:10.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB019436
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 136.9
Sample id Sample description nTPM
Hippocampus
nTPM: 127.4
1898 Male, age 80, left hemisphere 142.3
1855 Male, age 76, left hemisphere 127.3
2148 Female, age 91, left hemisphere 125.4
2529 Female, age 94, left hemisphere 124.2
1911 Female, age 85, right hemisphere 123.8
2621 Female, age 67, right hemisphere 121.4
Dentate gyrus
nTPM: 124.9
1927 Female, age 91, both hemispheres 140.8
2010 Male, age 76, both hemispheres 136.1
2528 Male, age 74, both hemispheres 121.6
2246 Female, age 85, both hemispheres 121.5
2530 Female, age 94, left hemisphere 117.0
2531 Female, age 67, both hemispheres 112.4
Entorhinal gyrus
nTPM: 116.9
1938 Female, age 85, left hemisphere 122.9
2117 Female, age 91, right hemisphere 119.9
1787 Male, age 76, left hemisphere 119.6
2764 Male, age 80, right hemisphere 114.0
2686 Male, age 75, right hemisphere 113.0
2613 Female, age 94, left hemisphere 112.3
Hippocampus, CA1
nTPM: 136.9
2749 Male, age 80, left hemisphere 168.3
1873 Female, age 85, both hemispheres 136.3
2045 Male, age 76, both hemispheres 132.0
2527 Male, age 74, both hemispheres 130.7
2082 Female, age 91, right hemisphere 117.3
Hippocampus, CA2
nTPM: 129.6
1892 Male, age 76, both hemispheres 148.1
1963 Male, age 80, left hemisphere 139.4
2249 Male, age 74, both hemispheres 128.4
2113 Female, age 91, right hemisphere 121.7
2437 Female, age 94, left hemisphere 120.3
1940 Female, age 85, left hemisphere 119.7
Hippocampus, CA3
nTPM: 131.7
2137 Male, age 80, left hemisphere 162.0
1867 Male, age 76, both hemispheres 146.1
1891 Female, age 85, both hemispheres 126.6
2436 Male, age 74, both hemispheres 120.9
2620 Female, age 94, left hemisphere 118.1
2861 Female, age 67, both hemispheres 116.6
Parahippocampal cortex
nTPM: 122.1
1850 Male, age 80, both hemispheres 129.6
2018 Male, age 76, both hemispheres 128.6
2250 Female, age 67, right hemisphere 123.5
1990 Female, age 91, right hemisphere 121.6
2693 Female, age 94, both hemispheres 121.5
1933 Female, age 85, both hemispheres 121.4
2692 Male, age 74, both hemispheres 121.2
2245 Female, age 91, both hemispheres 119.7
2622 Female, age 67, right hemisphere 117.8
2532 Female, age 72, left hemisphere 116.1
Perirhinal gyrus
nTPM: 125.6
1847 Female, age 91, left hemisphere 134.4
1841 Female, age 85, right hemisphere 130.8
2521 Female, age 94, right hemisphere 124.0
1794 Male, age 80, right hemisphere 123.3
2848 Male, age 76, right hemisphere 115.5
Subiculum
nTPM: 125.6
1901 Male, age 80, both hemispheres 138.9
2042 Male, age 76, both hemispheres 127.3
2619 Male, age 74, both hemispheres 124.8
2729 Female, age 91, right hemisphere 124.4
2438 Female, age 94, left hemisphere 120.0
1977 Female, age 85, both hemispheres 118.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 149.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 149.0
Samples: 197

Max nTPM: 306.8
Min nTPM: 60.8
Std nTPM: 46.6
Median nTPM: 142.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 306.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 288.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 279.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 265.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 256.5
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 254.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 252.1
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 244.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 241.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 239.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 232.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 4.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 4.7
FF:10153-102I9 76 years, female 6.3
FF:10169-103B7 60 years, female 3.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 78.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 74.3
Samples: 4

Max nTPM: 86.7
Min nTPM: 55.3
Sample A Female 85.6
Sample B Female 69.5
Sample C Male 86.7
Sample D Male 55.3
Entorhinal cortex
nTPM: 78.4
Samples: 4

Max nTPM: 84.6
Min nTPM: 71.9
Sample A Female 75.5
Sample B Female 81.7
Sample C Male 84.6
Sample D Male 71.9
Subiculum
nTPM: 68.8
Samples: 4

Max nTPM: 89.3
Min nTPM: 58.5
Sample A Female 89.3
Sample B Female 60.8
Sample C Male 58.5
Sample D Male 66.5
Ventral hippocampus
nTPM: 64.7
Samples: 4

Max nTPM: 75.0
Min nTPM: 52.8
Sample A Female 67.9
Sample B Female 52.8
Sample C Male 63.2
Sample D Male 75.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 121.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 119.8
Samples: 4

Max nTPM: 131.3
Min nTPM: 107.8
Sample A Male 107.8
Sample B Male 131.3
Sample C Female 126.6
Sample D Female 113.6
Hippocampal formation
nTPM: 121.6
Samples: 4

Max nTPM: 135.8
Min nTPM: 114.5
Sample A Male 135.8
Sample B Male 114.5
Sample C Female 120.5
Sample D Female 115.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.1
564750 Antisense, RP_040826_01_C05, Mouse strain C57BL/6J (56 days, male) 10.1

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