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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:104.4 nTPM
HPA:104.4 nTPM
GTEx:106.9 nTPM
FANTOM5:64.3 Scaled Tags Per Million
Pig:13.9 nTPM
Mouse:0.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049407
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 104.4
Sample id Sample description nTPM
Hippocampus
nTPM: 102.9
1898 Male, age 80, left hemisphere 111.1
1855 Male, age 76, left hemisphere 106.3
1911 Female, age 85, right hemisphere 101.3
2621 Female, age 67, right hemisphere 100.8
2148 Female, age 91, left hemisphere 98.9
2529 Female, age 94, left hemisphere 98.7
Dentate gyrus
nTPM: 102.1
2010 Male, age 76, both hemispheres 107.4
1927 Female, age 91, both hemispheres 104.3
2530 Female, age 94, left hemisphere 102.9
2246 Female, age 85, both hemispheres 101.6
2528 Male, age 74, both hemispheres 100.1
2531 Female, age 67, both hemispheres 96.0
Entorhinal gyrus
nTPM: 98.6
1938 Female, age 85, left hemisphere 101.7
2117 Female, age 91, right hemisphere 101.2
2764 Male, age 80, right hemisphere 99.8
1787 Male, age 76, left hemisphere 98.8
2686 Male, age 75, right hemisphere 95.4
2613 Female, age 94, left hemisphere 94.8
Hippocampus, CA1
nTPM: 104.4
1873 Female, age 85, both hemispheres 108.5
2749 Male, age 80, left hemisphere 108.1
2045 Male, age 76, both hemispheres 105.9
2527 Male, age 74, both hemispheres 100.8
2082 Female, age 91, right hemisphere 98.9
Hippocampus, CA2
nTPM: 102.3
1892 Male, age 76, both hemispheres 106.1
1963 Male, age 80, left hemisphere 105.4
2249 Male, age 74, both hemispheres 105.3
1940 Female, age 85, left hemisphere 100.1
2437 Female, age 94, left hemisphere 99.1
2113 Female, age 91, right hemisphere 97.8
Hippocampus, CA3
nTPM: 100.8
1867 Male, age 76, both hemispheres 105.1
2137 Male, age 80, left hemisphere 104.1
2436 Male, age 74, both hemispheres 102.2
2620 Female, age 94, left hemisphere 99.0
1891 Female, age 85, both hemispheres 98.9
2861 Female, age 67, both hemispheres 95.7
Parahippocampal cortex
nTPM: 97.8
2250 Female, age 67, right hemisphere 100.3
1850 Male, age 80, both hemispheres 100.2
1933 Female, age 85, both hemispheres 100.1
2018 Male, age 76, both hemispheres 99.9
2245 Female, age 91, both hemispheres 99.1
2693 Female, age 94, both hemispheres 97.1
2532 Female, age 72, left hemisphere 96.9
1990 Female, age 91, right hemisphere 96.3
2622 Female, age 67, right hemisphere 94.2
2692 Male, age 74, both hemispheres 93.9
Perirhinal gyrus
nTPM: 99.7
1841 Female, age 85, right hemisphere 103.5
1847 Female, age 91, left hemisphere 101.5
1794 Male, age 80, right hemisphere 100.0
2848 Male, age 76, right hemisphere 96.8
2521 Female, age 94, right hemisphere 96.7
Subiculum
nTPM: 100.5
2042 Male, age 76, both hemispheres 103.3
1901 Male, age 80, both hemispheres 102.0
1977 Female, age 85, both hemispheres 101.1
2729 Female, age 91, right hemisphere 99.8
2619 Male, age 74, both hemispheres 99.1
2438 Female, age 94, left hemisphere 97.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 106.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 106.9
Samples: 197

Max nTPM: 215.6
Min nTPM: 61.2
Std nTPM: 23.2
Median nTPM: 102.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 215.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 214.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 173.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 166.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 164.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 160.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 159.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 149.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 149.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 149.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 141.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.3
FF:10169-103B7 60 years, female 80.5
FF:10153-102I9 76 years, female 48.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.9
Samples: 4

Max nTPM: 20.1
Min nTPM: 10.7
Sample A Female 20.1
Sample B Female 12.5
Sample C Male 12.2
Sample D Male 10.7
Entorhinal cortex
nTPM: 8.2
Samples: 4

Max nTPM: 10.4
Min nTPM: 6.0
Sample A Female 7.7
Sample B Female 10.4
Sample C Male 8.5
Sample D Male 6.0
Subiculum
nTPM: 9.4
Samples: 4

Max nTPM: 13.3
Min nTPM: 7.8
Sample A Female 13.3
Sample B Female 8.4
Sample C Male 8.2
Sample D Male 7.8
Ventral hippocampus
nTPM: 11.6
Samples: 4

Max nTPM: 13.9
Min nTPM: 8.9
Sample A Female 12.5
Sample B Female 8.9
Sample C Male 11.2
Sample D Male 13.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0
Hippocampal formation
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.