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CREB3
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:42.2 nTPM
HPA:42.2 nTPM
GTEx:38.9 nTPM
FANTOM5:43.0 Scaled Tags Per Million
Pig:30.5 nTPM
Mouse:48.5 nTPM
Allen mouse:3.0 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 42.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 40.0
1857 Female, age 85, left hemisphere 42.6
2846 Female, age 79, unknown 42.2
2290 Female, age 72, unknown 41.2
1781 Male, age 74, unknown 40.4
1854 Male, age 80, left hemisphere 40.4
2289 Male, age 61, right hemisphere 38.0
2481 Female, age 94, left hemisphere 37.7
2288 Male, age 75, left hemisphere 37.3
Claustrum
nTPM: 38.5
2196 Female, age 79, unknown 39.7
2198 Male, age 80, both hemispheres 39.5
2568 Male, age 61, both hemispheres 39.5
1956 Male, age 74, unknown 38.6
2292 Female, age 85, both hemispheres 38.4
2645 Female, age 72, unknown 38.1
2392 Female, age 94, both hemispheres 37.8
2284 Female, age 91, both hemispheres 37.3
2491 Male, age 75, both hemispheres 37.2
Globus pallidus, externus
nTPM: 42.2
2646 Male, age 61, right hemisphere 43.7
2395 Male, age 75, both hemispheres 42.9
1996 Male, age 80, right hemisphere 42.4
2567 Female, age 72, unknown 41.5
2772 Female, age 79, unknown 40.7
Globus pallidus, internus
nTPM: 40.7
2287 Male, age 75, right hemisphere 43.0
2483 Female, age 94, right hemisphere 42.0
2566 Female, age 72, unknown 41.8
1818 Male, age 74, unknown 40.5
2037 Male, age 80, right hemisphere 39.6
2111 Female, age 85, right hemisphere 39.3
2778 Female, age 91, both hemispheres 38.6
Nucleus accumbens
nTPM: 39.9
2698 Female, age 72, unknown 41.7
1783 Male, age 74, unknown 40.9
1806 Female, age 85, left hemisphere 40.6
1856 Female, age 91, right hemisphere 40.2
2286 Male, age 75, left hemisphere 40.2
2732 Male, age 80, right hemisphere 38.8
2391 Female, age 94, left hemisphere 38.6
2824 Male, age 61, right hemisphere 38.4
Nucleus basalis of Meynert
nTPM: 40.7
2569 Male, age 61, both hemispheres 45.5
2393 Male, age 80, right hemisphere 40.1
2821 Male, age 75, both hemispheres 39.0
2484 Female, age 94, left hemisphere 38.2
Nucleus of the diagonal band
nTPM: 40.6
2775 Male, age 80, right hemisphere 42.9
1812 Female, age 91, both hemispheres 41.4
2195 Female, age 85, both hemispheres 40.6
2029 Male, age 61, right hemisphere 39.1
1979 Male, age 74, unknown 38.9
Olfactory tubercle
nTPM: 39.4
1846 Male, age 80, right hemisphere 41.7
1998 Female, age 91, both hemispheres 40.6
2487 Female, age 94, left hemisphere 38.0
2856 Male, age 75, right hemisphere 37.2
Putamen
nTPM: 39.9
1838 Male, age 80, right hemisphere 41.4
2466 Female, age 79, unknown 40.8
2489 Female, age 72, unknown 40.8
2647 Male, age 75, left hemisphere 40.6
2482 Female, age 94, left hemisphere 39.2
1937 Female, age 91, right hemisphere 38.6
1829 Male, age 74, unknown 38.1
Septal nuclei
nTPM: 39.8
2031 Female, age 72, unknown 41.0
1960 Male, age 74, unknown 40.6
2394 Male, age 61, left hemisphere 40.1
2629 Female, age 94, right hemisphere 39.9
2059 Female, age 85, both hemispheres 39.7
2009 Female, age 91, both hemispheres 39.3
2199 Male, age 80, right hemisphere 38.1

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 38.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 34.8
Samples: 246

Max nTPM: 64.2
Min nTPM: 20.0
Std nTPM: 6.8
Median nTPM: 33.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 64.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 61.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 60.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 54.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 54.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 53.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 51.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 50.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 49.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 48.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 48.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 38.9
Samples: 246

Max nTPM: 76.5
Min nTPM: 22.6
Std nTPM: 7.8
Median nTPM: 37.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 76.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 69.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 64.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 60.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 60.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 56.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 56.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 55.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 55.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 54.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 53.9
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Brain - Putamen (basal ganglia)
Average nTPM: 37.9
Samples: 205

Max nTPM: 64.9
Min nTPM: 26.7
Std nTPM: 7.4
Median nTPM: 35.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 64.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 60.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 60.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 59.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 58.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 58.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 57.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 56.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 54.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 54.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 51.6
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 29.1
FF:10164-103B2 76 years, female 29.1
Globus pallidus
Scaled Tags Per Million: 23.4
FF:10175-103C4 60 years, female 23.6
FF:10161-103A8 76 years, female 23.3
Nucleus accumbens
Scaled Tags Per Million: 27.8
FF:10037-101F1 23-56 years, mixed 27.8
Putamen
Scaled Tags Per Million: 43.0
FF:10176-103C5 60 years, female 43.0

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 30.5
Pig sample Sample description nTPM
Caudate
nTPM: 28.7
Samples: 4

Max nTPM: 32.4
Min nTPM: 24.9
Sample A Female 24.9
Sample B Female 30.6
Sample C Male 32.4
Sample D Male 27.0
Putamen
nTPM: 30.5
Samples: 4

Max nTPM: 40.7
Min nTPM: 23.5
Sample A Female 23.5
Sample B Female 26.7
Sample C Male 40.7
Sample D Male 31.0
Septum
nTPM: 28.2
Samples: 4

Max nTPM: 31.4
Min nTPM: 25.2
Sample A Female 30.6
Sample B Female 25.6
Sample C Male 31.4
Sample D Male 25.2
Ventral pallidum
nTPM: 25.1
Samples: 4

Max nTPM: 26.5
Min nTPM: 22.6
Sample A Female 26.5
Sample B Female 26.0
Sample C Male 25.3
Sample D Male 22.6

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 48.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 40.8
Samples: 4

Max nTPM: 41.7
Min nTPM: 40.0
Sample A Male 41.1
Sample B Male 40.4
Sample C Female 40.0
Sample D Female 41.7
Septum
nTPM: 48.5
Samples: 4

Max nTPM: 52.6
Min nTPM: 44.6
Sample A Male 45.9
Sample B Male 52.6
Sample C Female 51.0
Sample D Female 44.6
Ventral forebrain
nTPM: 44.6
Samples: 4

Max nTPM: 48.6
Min nTPM: 40.9
Sample A Male 40.9
Sample B Male 48.6
Sample C Female 44.0
Sample D Female 44.9

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.0
69080032 Antisense, RP_050324_01_E10, Mouse strain C57BL/6J (56 days, male) 3.0
Pallidum
Expression energy: 2.9
69080032 Antisense, RP_050324_01_E10, Mouse strain C57BL/6J (56 days, male) 2.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.