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NPDC1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:143.3 nTPM
HPA:143.3 nTPM
GTEx:184.0 nTPM
FANTOM5:276.3 Scaled Tags Per Million
Pig:82.2 nTPM
Mouse:181.6 nTPM
Allen mouse:21.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008189
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 143.3
Sample id Sample description nTPM
Hippocampus
nTPM: 139.5
1855 Male, age 76, left hemisphere 155.3
1898 Male, age 80, left hemisphere 145.5
2148 Female, age 91, left hemisphere 139.0
2621 Female, age 67, right hemisphere 136.6
2529 Female, age 94, left hemisphere 133.1
1911 Female, age 85, right hemisphere 127.4
Dentate gyrus
nTPM: 141.4
2530 Female, age 94, left hemisphere 175.5
2010 Male, age 76, both hemispheres 145.3
1927 Female, age 91, both hemispheres 145.2
2531 Female, age 67, both hemispheres 132.8
2246 Female, age 85, both hemispheres 124.7
2528 Male, age 74, both hemispheres 124.6
Entorhinal gyrus
nTPM: 143.3
2613 Female, age 94, left hemisphere 162.8
1787 Male, age 76, left hemisphere 148.1
2764 Male, age 80, right hemisphere 145.5
1938 Female, age 85, left hemisphere 142.0
2686 Male, age 75, right hemisphere 137.7
2117 Female, age 91, right hemisphere 123.7
Hippocampus, CA1
nTPM: 141.4
2749 Male, age 80, left hemisphere 172.8
2045 Male, age 76, both hemispheres 151.1
1873 Female, age 85, both hemispheres 147.3
2527 Male, age 74, both hemispheres 120.1
2082 Female, age 91, right hemisphere 115.7
Hippocampus, CA2
nTPM: 133.3
1892 Male, age 76, both hemispheres 153.1
1963 Male, age 80, left hemisphere 146.8
2437 Female, age 94, left hemisphere 144.8
1940 Female, age 85, left hemisphere 124.2
2249 Male, age 74, both hemispheres 115.9
2113 Female, age 91, right hemisphere 115.2
Hippocampus, CA3
nTPM: 135.5
2861 Female, age 67, both hemispheres 157.5
2137 Male, age 80, left hemisphere 152.5
2620 Female, age 94, left hemisphere 147.1
1867 Male, age 76, both hemispheres 142.5
1891 Female, age 85, both hemispheres 112.9
2436 Male, age 74, both hemispheres 100.6
Parahippocampal cortex
nTPM: 128.5
2245 Female, age 91, both hemispheres 138.5
2622 Female, age 67, right hemisphere 138.0
1933 Female, age 85, both hemispheres 135.6
2018 Male, age 76, both hemispheres 131.3
2250 Female, age 67, right hemisphere 125.8
1990 Female, age 91, right hemisphere 124.9
2532 Female, age 72, left hemisphere 124.0
2692 Male, age 74, both hemispheres 123.5
1850 Male, age 80, both hemispheres 122.0
2693 Female, age 94, both hemispheres 121.5
Perirhinal gyrus
nTPM: 133.8
1847 Female, age 91, left hemisphere 144.1
1794 Male, age 80, right hemisphere 138.3
2521 Female, age 94, right hemisphere 134.8
2848 Male, age 76, right hemisphere 126.8
1841 Female, age 85, right hemisphere 124.8
Subiculum
nTPM: 122.7
2619 Male, age 74, both hemispheres 130.2
1977 Female, age 85, both hemispheres 128.7
1901 Male, age 80, both hemispheres 128.5
2042 Male, age 76, both hemispheres 120.3
2729 Female, age 91, right hemisphere 119.5
2438 Female, age 94, left hemisphere 109.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 184.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 184.0
Samples: 197

Max nTPM: 397.3
Min nTPM: 55.6
Std nTPM: 59.6
Median nTPM: 178.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 397.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 384.8
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 316.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 312.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 310.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 309.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 307.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 300.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 299.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 299.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 294.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 276.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 276.3
FF:10169-103B7 60 years, female 362.0
FF:10153-102I9 76 years, female 190.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 82.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 73.7
Samples: 4

Max nTPM: 93.2
Min nTPM: 50.3
Sample A Female 93.2
Sample B Female 74.1
Sample C Male 77.3
Sample D Male 50.3
Entorhinal cortex
nTPM: 81.3
Samples: 4

Max nTPM: 94.7
Min nTPM: 70.6
Sample A Female 84.8
Sample B Female 75.2
Sample C Male 94.7
Sample D Male 70.6
Subiculum
nTPM: 78.6
Samples: 4

Max nTPM: 104.8
Min nTPM: 59.8
Sample A Female 104.8
Sample B Female 70.4
Sample C Male 79.4
Sample D Male 59.8
Ventral hippocampus
nTPM: 82.2
Samples: 4

Max nTPM: 110.3
Min nTPM: 59.7
Sample A Female 83.3
Sample B Female 59.7
Sample C Male 110.3
Sample D Male 75.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 181.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 134.4
Samples: 4

Max nTPM: 136.3
Min nTPM: 130.9
Sample A Male 135.6
Sample B Male 134.6
Sample C Female 130.9
Sample D Female 136.3
Hippocampal formation
nTPM: 181.6
Samples: 4

Max nTPM: 197.0
Min nTPM: 156.0
Sample A Male 156.0
Sample B Male 187.2
Sample C Female 197.0
Sample D Female 186.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.0
715 Antisense, RP_040324_01_E08, Mouse strain C57BL/6J (56 days, male) 21.0
716 Antisense, RP_040324_01_E08, Mouse strain C57BL/6J (56 days, male) 12.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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