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ABCA2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:92.4 nTPM
HPA:92.4 nTPM
GTEx:89.7 nTPM
FANTOM5:153.8 Scaled Tags Per Million
Mouse:49.1 nTPM
Allen mouse:8.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042886
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 92.4
Sample id Sample description nTPM
Hippocampus
nTPM: 53.1
1911 Female, age 85, right hemisphere 80.1
2529 Female, age 94, left hemisphere 69.3
2621 Female, age 67, right hemisphere 53.5
2148 Female, age 91, left hemisphere 42.8
1898 Male, age 80, left hemisphere 37.2
1855 Male, age 76, left hemisphere 35.4
Dentate gyrus
nTPM: 65.2
2530 Female, age 94, left hemisphere 137.0
2528 Male, age 74, both hemispheres 72.2
2010 Male, age 76, both hemispheres 60.5
2531 Female, age 67, both hemispheres 56.0
2246 Female, age 85, both hemispheres 45.9
1927 Female, age 91, both hemispheres 19.6
Entorhinal gyrus
nTPM: 69.8
2117 Female, age 91, right hemisphere 136.2
2764 Male, age 80, right hemisphere 107.0
2613 Female, age 94, left hemisphere 64.8
1787 Male, age 76, left hemisphere 42.0
1938 Female, age 85, left hemisphere 37.6
2686 Male, age 75, right hemisphere 31.4
Hippocampus, CA1
nTPM: 41.1
2082 Female, age 91, right hemisphere 58.8
1873 Female, age 85, both hemispheres 54.6
2527 Male, age 74, both hemispheres 45.9
2749 Male, age 80, left hemisphere 40.3
2045 Male, age 76, both hemispheres 5.8
Hippocampus, CA2
nTPM: 56.9
1963 Male, age 80, left hemisphere 83.7
2249 Male, age 74, both hemispheres 74.9
2113 Female, age 91, right hemisphere 65.2
2437 Female, age 94, left hemisphere 58.7
1940 Female, age 85, left hemisphere 43.8
1892 Male, age 76, both hemispheres 14.9
Hippocampus, CA3
nTPM: 37.2
1891 Female, age 85, both hemispheres 88.1
1867 Male, age 76, both hemispheres 34.5
2620 Female, age 94, left hemisphere 32.5
2137 Male, age 80, left hemisphere 30.9
2436 Male, age 74, both hemispheres 19.6
2861 Female, age 67, both hemispheres 17.5
Parahippocampal cortex
nTPM: 36.0
2532 Female, age 72, left hemisphere 72.6
1990 Female, age 91, right hemisphere 67.9
2692 Male, age 74, both hemispheres 66.6
2245 Female, age 91, both hemispheres 42.4
2018 Male, age 76, both hemispheres 35.8
1933 Female, age 85, both hemispheres 30.4
1850 Male, age 80, both hemispheres 30.2
2693 Female, age 94, both hemispheres 11.5
2250 Female, age 67, right hemisphere 2.4
2622 Female, age 67, right hemisphere 0.0
Perirhinal gyrus
nTPM: 15.7
2521 Female, age 94, right hemisphere 36.8
1794 Male, age 80, right hemisphere 22.9
2848 Male, age 76, right hemisphere 13.1
1847 Female, age 91, left hemisphere 5.1
1841 Female, age 85, right hemisphere 0.6
Subiculum
nTPM: 92.4
2042 Male, age 76, both hemispheres 158.7
1901 Male, age 80, both hemispheres 122.2
1977 Female, age 85, both hemispheres 90.7
2619 Male, age 74, both hemispheres 65.7
2438 Female, age 94, left hemisphere 63.5
2729 Female, age 91, right hemisphere 53.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 89.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 89.7
Samples: 197

Max nTPM: 322.3
Min nTPM: 8.6
Std nTPM: 56.1
Median nTPM: 71.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 322.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 278.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 262.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 243.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 231.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 220.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 218.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 215.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 210.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 208.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 204.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 153.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 153.8
FF:10153-102I9 76 years, female 179.0
FF:10169-103B7 60 years, female 128.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 49.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.3
Samples: 4

Max nTPM: 47.5
Min nTPM: 38.8
Sample A Male 47.5
Sample B Male 39.5
Sample C Female 38.8
Sample D Female 47.4
Hippocampal formation
nTPM: 49.1
Samples: 4

Max nTPM: 67.3
Min nTPM: 30.6
Sample A Male 30.6
Sample B Male 50.2
Sample C Female 67.3
Sample D Female 48.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.4
69514530 Antisense, RP_050419_03_E11, Mouse strain C57BL/6J (56 days, male) 8.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.