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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:117.4 nTPM
HPA:117.4 nTPM
GTEx:87.3 nTPM
FANTOM5:272.5 Scaled Tags Per Million
Pig:157.9 nTPM
Mouse:268.2 nTPM
Allen mouse:15.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044605
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 117.4
Sample id Sample description nTPM
Hippocampus
nTPM: 101.0
2148 Female, age 91, left hemisphere 119.0
1898 Male, age 80, left hemisphere 113.2
2529 Female, age 94, left hemisphere 110.2
2621 Female, age 67, right hemisphere 104.0
1855 Male, age 76, left hemisphere 83.4
1911 Female, age 85, right hemisphere 75.9
Dentate gyrus
nTPM: 105.0
2530 Female, age 94, left hemisphere 121.2
1927 Female, age 91, both hemispheres 118.8
2528 Male, age 74, both hemispheres 106.7
2531 Female, age 67, both hemispheres 105.7
2246 Female, age 85, both hemispheres 101.7
2010 Male, age 76, both hemispheres 75.9
Entorhinal gyrus
nTPM: 117.4
2613 Female, age 94, left hemisphere 142.1
1938 Female, age 85, left hemisphere 122.8
1787 Male, age 76, left hemisphere 119.2
2764 Male, age 80, right hemisphere 113.8
2686 Male, age 75, right hemisphere 110.6
2117 Female, age 91, right hemisphere 95.9
Hippocampus, CA1
nTPM: 100.5
2082 Female, age 91, right hemisphere 117.1
2527 Male, age 74, both hemispheres 100.3
2749 Male, age 80, left hemisphere 100.3
1873 Female, age 85, both hemispheres 98.8
2045 Male, age 76, both hemispheres 86.1
Hippocampus, CA2
nTPM: 93.9
1892 Male, age 76, both hemispheres 111.2
2437 Female, age 94, left hemisphere 111.2
1963 Male, age 80, left hemisphere 99.1
2113 Female, age 91, right hemisphere 98.5
1940 Female, age 85, left hemisphere 72.0
2249 Male, age 74, both hemispheres 71.5
Hippocampus, CA3
nTPM: 103.9
2861 Female, age 67, both hemispheres 158.4
2620 Female, age 94, left hemisphere 130.0
1867 Male, age 76, both hemispheres 104.7
2137 Male, age 80, left hemisphere 84.4
1891 Female, age 85, both hemispheres 81.6
2436 Male, age 74, both hemispheres 64.2
Parahippocampal cortex
nTPM: 103.6
2692 Male, age 74, both hemispheres 121.9
1990 Female, age 91, right hemisphere 120.7
2622 Female, age 67, right hemisphere 117.8
1933 Female, age 85, both hemispheres 110.9
1850 Male, age 80, both hemispheres 106.0
2245 Female, age 91, both hemispheres 101.1
2250 Female, age 67, right hemisphere 98.9
2693 Female, age 94, both hemispheres 97.1
2532 Female, age 72, left hemisphere 86.7
2018 Male, age 76, both hemispheres 75.2
Perirhinal gyrus
nTPM: 108.5
1847 Female, age 91, left hemisphere 151.4
1794 Male, age 80, right hemisphere 115.6
2521 Female, age 94, right hemisphere 97.5
1841 Female, age 85, right hemisphere 91.7
2848 Male, age 76, right hemisphere 86.2
Subiculum
nTPM: 92.6
2619 Male, age 74, both hemispheres 122.6
1977 Female, age 85, both hemispheres 108.8
2729 Female, age 91, right hemisphere 100.1
2438 Female, age 94, left hemisphere 98.0
1901 Male, age 80, both hemispheres 77.3
2042 Male, age 76, both hemispheres 48.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 87.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 87.3
Samples: 197

Max nTPM: 177.0
Min nTPM: 19.6
Std nTPM: 31.1
Median nTPM: 86.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 177.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 172.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 160.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 151.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 145.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 144.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 141.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 141.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 137.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 137.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 136.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 272.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 272.5
FF:10169-103B7 60 years, female 343.2
FF:10153-102I9 76 years, female 201.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 157.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 117.0
Samples: 4

Max nTPM: 142.5
Min nTPM: 79.2
Sample A Female 142.5
Sample B Female 135.5
Sample C Male 110.9
Sample D Male 79.2
Entorhinal cortex
nTPM: 130.6
Samples: 4

Max nTPM: 153.1
Min nTPM: 112.5
Sample A Female 153.1
Sample B Female 119.5
Sample C Male 137.1
Sample D Male 112.5
Subiculum
nTPM: 153.7
Samples: 4

Max nTPM: 181.9
Min nTPM: 131.5
Sample A Female 181.9
Sample B Female 131.5
Sample C Male 169.6
Sample D Male 131.8
Ventral hippocampus
nTPM: 157.9
Samples: 4

Max nTPM: 230.5
Min nTPM: 109.1
Sample A Female 181.9
Sample B Female 110.1
Sample C Male 230.5
Sample D Male 109.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 268.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 268.2
Samples: 4

Max nTPM: 351.2
Min nTPM: 233.4
Sample A Male 234.6
Sample B Male 233.4
Sample C Female 253.5
Sample D Female 351.2
Hippocampal formation
nTPM: 228.7
Samples: 4

Max nTPM: 250.5
Min nTPM: 200.9
Sample A Male 200.9
Sample B Male 240.6
Sample C Female 250.5
Sample D Female 222.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.5
69262230 Antisense, RP_050301_01_F10, Mouse strain C57BL/6J (56 days, male) 22.8
70812774 Antisense, RP_050712_02_E12, Mouse strain C57BL/6J (56 days, male) 8.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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