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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:16.4 nTPM
HPA:16.4 nTPM
GTEx:9.5 nTPM
FANTOM5:50.3 Scaled Tags Per Million
Pig:27.5 nTPM
Mouse:23.7 nTPM
Allen mouse:9.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036566
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.4
Sample id Sample description nTPM
Hippocampus
nTPM: 13.6
1855 Male, age 76, left hemisphere 15.0
2148 Female, age 91, left hemisphere 14.8
1898 Male, age 80, left hemisphere 14.4
2621 Female, age 67, right hemisphere 13.3
2529 Female, age 94, left hemisphere 13.1
1911 Female, age 85, right hemisphere 10.9
Dentate gyrus
nTPM: 14.1
1927 Female, age 91, both hemispheres 17.9
2010 Male, age 76, both hemispheres 17.2
2531 Female, age 67, both hemispheres 13.8
2530 Female, age 94, left hemisphere 13.4
2246 Female, age 85, both hemispheres 11.9
2528 Male, age 74, both hemispheres 10.5
Entorhinal gyrus
nTPM: 13.0
1787 Male, age 76, left hemisphere 14.6
2613 Female, age 94, left hemisphere 14.5
2764 Male, age 80, right hemisphere 14.4
1938 Female, age 85, left hemisphere 12.7
2117 Female, age 91, right hemisphere 10.9
2686 Male, age 75, right hemisphere 10.6
Hippocampus, CA1
nTPM: 16.4
2045 Male, age 76, both hemispheres 22.3
2749 Male, age 80, left hemisphere 22.1
1873 Female, age 85, both hemispheres 14.7
2527 Male, age 74, both hemispheres 11.9
2082 Female, age 91, right hemisphere 10.7
Hippocampus, CA2
nTPM: 14.0
1892 Male, age 76, both hemispheres 18.1
1963 Male, age 80, left hemisphere 17.3
2249 Male, age 74, both hemispheres 13.3
2113 Female, age 91, right hemisphere 11.9
2437 Female, age 94, left hemisphere 11.9
1940 Female, age 85, left hemisphere 11.4
Hippocampus, CA3
nTPM: 14.9
2620 Female, age 94, left hemisphere 17.2
2137 Male, age 80, left hemisphere 16.8
1867 Male, age 76, both hemispheres 16.2
2861 Female, age 67, both hemispheres 13.8
2436 Male, age 74, both hemispheres 13.3
1891 Female, age 85, both hemispheres 11.8
Parahippocampal cortex
nTPM: 12.3
1933 Female, age 85, both hemispheres 13.6
2622 Female, age 67, right hemisphere 13.1
1990 Female, age 91, right hemisphere 12.9
2250 Female, age 67, right hemisphere 12.9
2693 Female, age 94, both hemispheres 12.9
1850 Male, age 80, both hemispheres 12.3
2245 Female, age 91, both hemispheres 11.8
2532 Female, age 72, left hemisphere 11.6
2018 Male, age 76, both hemispheres 10.7
2692 Male, age 74, both hemispheres 10.7
Perirhinal gyrus
nTPM: 13.9
1794 Male, age 80, right hemisphere 14.2
1847 Female, age 91, left hemisphere 14.0
1841 Female, age 85, right hemisphere 13.9
2521 Female, age 94, right hemisphere 13.8
2848 Male, age 76, right hemisphere 13.5
Subiculum
nTPM: 13.1
2729 Female, age 91, right hemisphere 14.3
2042 Male, age 76, both hemispheres 13.9
2619 Male, age 74, both hemispheres 13.7
1977 Female, age 85, both hemispheres 13.2
1901 Male, age 80, both hemispheres 12.7
2438 Female, age 94, left hemisphere 10.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.5
Samples: 197

Max nTPM: 17.6
Min nTPM: 1.8
Std nTPM: 2.8
Median nTPM: 9.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 17.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 17.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 16.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 16.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 15.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 15.2
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 15.1
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 14.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 14.5
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 14.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 13.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.3
FF:10169-103B7 60 years, female 54.4
FF:10153-102I9 76 years, female 46.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.9
Samples: 4

Max nTPM: 31.6
Min nTPM: 22.1
Sample A Female 31.6
Sample B Female 27.9
Sample C Male 25.9
Sample D Male 22.1
Entorhinal cortex
nTPM: 26.6
Samples: 4

Max nTPM: 30.4
Min nTPM: 23.2
Sample A Female 26.5
Sample B Female 26.3
Sample C Male 30.4
Sample D Male 23.2
Subiculum
nTPM: 27.5
Samples: 4

Max nTPM: 34.1
Min nTPM: 24.4
Sample A Female 34.1
Sample B Female 25.9
Sample C Male 25.6
Sample D Male 24.4
Ventral hippocampus
nTPM: 26.3
Samples: 4

Max nTPM: 31.8
Min nTPM: 22.4
Sample A Female 25.2
Sample B Female 22.4
Sample C Male 31.8
Sample D Male 25.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.7
Samples: 4

Max nTPM: 28.2
Min nTPM: 20.7
Sample A Male 22.6
Sample B Male 23.1
Sample C Female 20.7
Sample D Female 28.2
Hippocampal formation
nTPM: 22.4
Samples: 4

Max nTPM: 24.3
Min nTPM: 19.8
Sample A Male 19.8
Sample B Male 24.1
Sample C Female 24.3
Sample D Female 21.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.2
69816541 Antisense, RP_050510_01_C08, Mouse strain C57BL/6J (56 days, male) 9.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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