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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:37.5 nTPM
HPA:37.5 nTPM
GTEx:32.2 nTPM
FANTOM5:141.0 Scaled Tags Per Million
Pig:45.0 nTPM
Mouse:59.0 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.5
Sample id Sample description nTPM
Hippocampus
nTPM: 37.2
2529 Female, age 94, left hemisphere 38.0
1898 Male, age 80, left hemisphere 37.8
1911 Female, age 85, right hemisphere 37.7
1855 Male, age 76, left hemisphere 37.1
2621 Female, age 67, right hemisphere 36.7
2148 Female, age 91, left hemisphere 36.1
Dentate gyrus
nTPM: 36.5
2010 Male, age 76, both hemispheres 37.5
2246 Female, age 85, both hemispheres 37.2
2528 Male, age 74, both hemispheres 37.2
1927 Female, age 91, both hemispheres 36.4
2531 Female, age 67, both hemispheres 36.0
2530 Female, age 94, left hemisphere 34.6
Entorhinal gyrus
nTPM: 36.2
1938 Female, age 85, left hemisphere 38.3
2686 Male, age 75, right hemisphere 36.8
1787 Male, age 76, left hemisphere 36.6
2117 Female, age 91, right hemisphere 36.2
2764 Male, age 80, right hemisphere 35.5
2613 Female, age 94, left hemisphere 33.6
Hippocampus, CA1
nTPM: 37.0
2749 Male, age 80, left hemisphere 38.2
2527 Male, age 74, both hemispheres 37.5
1873 Female, age 85, both hemispheres 36.9
2045 Male, age 76, both hemispheres 36.2
2082 Female, age 91, right hemisphere 36.0
Hippocampus, CA2
nTPM: 36.7
1892 Male, age 76, both hemispheres 37.7
2249 Male, age 74, both hemispheres 37.7
2113 Female, age 91, right hemisphere 36.9
1940 Female, age 85, left hemisphere 36.6
1963 Male, age 80, left hemisphere 35.7
2437 Female, age 94, left hemisphere 35.7
Hippocampus, CA3
nTPM: 37.0
1891 Female, age 85, both hemispheres 38.1
1867 Male, age 76, both hemispheres 37.7
2137 Male, age 80, left hemisphere 37.7
2436 Male, age 74, both hemispheres 37.2
2861 Female, age 67, both hemispheres 36.1
2620 Female, age 94, left hemisphere 35.1
Parahippocampal cortex
nTPM: 37.1
1850 Male, age 80, both hemispheres 38.0
2018 Male, age 76, both hemispheres 37.9
2245 Female, age 91, both hemispheres 37.6
2692 Male, age 74, both hemispheres 37.2
1933 Female, age 85, both hemispheres 37.1
2250 Female, age 67, right hemisphere 37.0
2693 Female, age 94, both hemispheres 37.0
2622 Female, age 67, right hemisphere 36.9
1990 Female, age 91, right hemisphere 36.4
2532 Female, age 72, left hemisphere 36.4
Perirhinal gyrus
nTPM: 37.5
1794 Male, age 80, right hemisphere 38.5
1841 Female, age 85, right hemisphere 38.4
1847 Female, age 91, left hemisphere 37.4
2521 Female, age 94, right hemisphere 37.2
2848 Male, age 76, right hemisphere 35.8
Subiculum
nTPM: 37.3
1901 Male, age 80, both hemispheres 37.6
2042 Male, age 76, both hemispheres 37.5
2619 Male, age 74, both hemispheres 37.5
1977 Female, age 85, both hemispheres 37.2
2438 Female, age 94, left hemisphere 37.0
2729 Female, age 91, right hemisphere 36.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.2
Samples: 197

Max nTPM: 56.3
Min nTPM: 21.9
Std nTPM: 5.3
Median nTPM: 31.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 56.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 52.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 49.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 48.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 45.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 44.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 44.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 43.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 43.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 42.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 40.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 141.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 141.0
FF:10169-103B7 60 years, female 172.6
FF:10153-102I9 76 years, female 109.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 45.0
Samples: 4

Max nTPM: 57.2
Min nTPM: 38.7
Sample A Female 57.2
Sample B Female 43.4
Sample C Male 40.8
Sample D Male 38.7
Entorhinal cortex
nTPM: 40.4
Samples: 4

Max nTPM: 46.2
Min nTPM: 33.3
Sample A Female 39.5
Sample B Female 46.2
Sample C Male 42.6
Sample D Male 33.3
Subiculum
nTPM: 37.2
Samples: 4

Max nTPM: 51.0
Min nTPM: 32.3
Sample A Female 51.0
Sample B Female 32.7
Sample C Male 32.7
Sample D Male 32.3
Ventral hippocampus
nTPM: 38.9
Samples: 4

Max nTPM: 43.2
Min nTPM: 31.3
Sample A Female 42.0
Sample B Female 31.3
Sample C Male 38.9
Sample D Male 43.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 59.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.1
Samples: 4

Max nTPM: 63.2
Min nTPM: 50.8
Sample A Male 53.9
Sample B Male 63.2
Sample C Female 60.5
Sample D Female 50.8
Hippocampal formation
nTPM: 59.0
Samples: 4

Max nTPM: 66.7
Min nTPM: 54.9
Sample A Male 66.7
Sample B Male 54.9
Sample C Female 56.0
Sample D Female 58.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
69105321 Antisense, RP_050316_02_B12, Mouse strain C57BL/6J (56 days, male) 9.5

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The Human Protein Atlas

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