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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:25.2 nTPM
HPA:25.2 nTPM
GTEx:37.9 nTPM
FANTOM5:54.5 Scaled Tags Per Million
Pig:21.0 nTPM
Mouse:102.5 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057150Antibody CAB015228
Glial cells Not detectedMedium
Neuronal cells Not detectedHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.2
Sample id Sample description nTPM
Hippocampus
nTPM: 20.0
1855 Male, age 76, left hemisphere 26.0
1898 Male, age 80, left hemisphere 22.0
2621 Female, age 67, right hemisphere 20.7
2529 Female, age 94, left hemisphere 17.9
2148 Female, age 91, left hemisphere 16.8
1911 Female, age 85, right hemisphere 16.4
Dentate gyrus
nTPM: 21.1
2530 Female, age 94, left hemisphere 29.3
2010 Male, age 76, both hemispheres 28.3
2246 Female, age 85, both hemispheres 20.9
2531 Female, age 67, both hemispheres 17.7
1927 Female, age 91, both hemispheres 17.5
2528 Male, age 74, both hemispheres 12.6
Entorhinal gyrus
nTPM: 16.3
2764 Male, age 80, right hemisphere 21.9
1787 Male, age 76, left hemisphere 20.9
2613 Female, age 94, left hemisphere 17.3
1938 Female, age 85, left hemisphere 14.6
2117 Female, age 91, right hemisphere 13.6
2686 Male, age 75, right hemisphere 9.3
Hippocampus, CA1
nTPM: 25.2
2749 Male, age 80, left hemisphere 43.7
2045 Male, age 76, both hemispheres 35.8
1873 Female, age 85, both hemispheres 21.9
2527 Male, age 74, both hemispheres 16.8
2082 Female, age 91, right hemisphere 7.6
Hippocampus, CA2
nTPM: 19.6
1892 Male, age 76, both hemispheres 34.2
1963 Male, age 80, left hemisphere 24.2
2437 Female, age 94, left hemisphere 17.4
2249 Male, age 74, both hemispheres 16.0
1940 Female, age 85, left hemisphere 13.3
2113 Female, age 91, right hemisphere 12.4
Hippocampus, CA3
nTPM: 21.8
2620 Female, age 94, left hemisphere 33.0
2137 Male, age 80, left hemisphere 28.1
1867 Male, age 76, both hemispheres 28.0
2861 Female, age 67, both hemispheres 15.8
1891 Female, age 85, both hemispheres 13.4
2436 Male, age 74, both hemispheres 12.4
Parahippocampal cortex
nTPM: 14.8
2245 Female, age 91, both hemispheres 27.1
1933 Female, age 85, both hemispheres 17.0
2018 Male, age 76, both hemispheres 16.7
2250 Female, age 67, right hemisphere 16.2
2532 Female, age 72, left hemisphere 16.2
1850 Male, age 80, both hemispheres 14.6
1990 Female, age 91, right hemisphere 13.6
2692 Male, age 74, both hemispheres 9.7
2693 Female, age 94, both hemispheres 9.0
2622 Female, age 67, right hemisphere 8.2
Perirhinal gyrus
nTPM: 19.4
1794 Male, age 80, right hemisphere 25.1
1847 Female, age 91, left hemisphere 21.5
2521 Female, age 94, right hemisphere 19.4
2848 Male, age 76, right hemisphere 17.1
1841 Female, age 85, right hemisphere 14.1
Subiculum
nTPM: 15.7
1977 Female, age 85, both hemispheres 21.0
2042 Male, age 76, both hemispheres 20.0
1901 Male, age 80, both hemispheres 18.9
2619 Male, age 74, both hemispheres 12.6
2438 Female, age 94, left hemisphere 10.9
2729 Female, age 91, right hemisphere 10.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.9
Samples: 197

Max nTPM: 107.6
Min nTPM: 14.3
Std nTPM: 15.2
Median nTPM: 36.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 107.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 83.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 77.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 75.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 71.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 71.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 71.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 69.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 68.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 68.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 68.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 54.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 54.5
FF:10169-103B7 60 years, female 65.9
FF:10153-102I9 76 years, female 43.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.0
Samples: 4

Max nTPM: 30.1
Min nTPM: 14.7
Sample A Female 30.1
Sample B Female 21.1
Sample C Male 17.9
Sample D Male 14.7
Entorhinal cortex
nTPM: 20.1
Samples: 4

Max nTPM: 23.6
Min nTPM: 14.4
Sample A Female 21.4
Sample B Female 23.6
Sample C Male 21.0
Sample D Male 14.4
Subiculum
nTPM: 18.1
Samples: 4

Max nTPM: 25.5
Min nTPM: 15.4
Sample A Female 25.5
Sample B Female 15.8
Sample C Male 15.4
Sample D Male 15.8
Ventral hippocampus
nTPM: 18.7
Samples: 4

Max nTPM: 22.7
Min nTPM: 13.7
Sample A Female 21.6
Sample B Female 13.7
Sample C Male 22.7
Sample D Male 16.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 102.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 90.7
Samples: 4

Max nTPM: 93.3
Min nTPM: 88.5
Sample A Male 91.3
Sample B Male 93.3
Sample C Female 88.5
Sample D Female 89.5
Hippocampal formation
nTPM: 102.5
Samples: 4

Max nTPM: 107.1
Min nTPM: 93.5
Sample A Male 106.3
Sample B Male 93.5
Sample C Female 103.1
Sample D Female 107.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.