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TBC1D12
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:12.4 nTPM
HPA:12.4 nTPM
GTEx:11.9 nTPM
FANTOM5:23.1 Scaled Tags Per Million
Pig:16.7 nTPM
Mouse:8.3 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038277Antibody HPA038645
Glial cells MediumLow
Neuronal cells LowMedium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.4
Sample id Sample description nTPM
Hippocampus
nTPM: 10.3
1911 Female, age 85, right hemisphere 11.7
1898 Male, age 80, left hemisphere 10.8
2529 Female, age 94, left hemisphere 10.8
2621 Female, age 67, right hemisphere 10.3
1855 Male, age 76, left hemisphere 9.3
2148 Female, age 91, left hemisphere 8.9
Dentate gyrus
nTPM: 11.1
2530 Female, age 94, left hemisphere 17.1
2010 Male, age 76, both hemispheres 12.2
2528 Male, age 74, both hemispheres 10.4
2246 Female, age 85, both hemispheres 9.3
2531 Female, age 67, both hemispheres 9.0
1927 Female, age 91, both hemispheres 8.3
Entorhinal gyrus
nTPM: 10.8
2117 Female, age 91, right hemisphere 14.9
2764 Male, age 80, right hemisphere 11.6
2686 Male, age 75, right hemisphere 10.2
1938 Female, age 85, left hemisphere 10.1
2613 Female, age 94, left hemisphere 9.4
1787 Male, age 76, left hemisphere 8.5
Hippocampus, CA1
nTPM: 9.4
1873 Female, age 85, both hemispheres 10.1
2527 Male, age 74, both hemispheres 9.9
2749 Male, age 80, left hemisphere 9.6
2045 Male, age 76, both hemispheres 8.7
2082 Female, age 91, right hemisphere 8.4
Hippocampus, CA2
nTPM: 10.7
1963 Male, age 80, left hemisphere 12.3
2249 Male, age 74, both hemispheres 11.3
2437 Female, age 94, left hemisphere 11.1
1940 Female, age 85, left hemisphere 10.8
1892 Male, age 76, both hemispheres 9.5
2113 Female, age 91, right hemisphere 9.3
Hippocampus, CA3
nTPM: 8.8
1891 Female, age 85, both hemispheres 12.1
1867 Male, age 76, both hemispheres 10.6
2436 Male, age 74, both hemispheres 8.3
2137 Male, age 80, left hemisphere 7.8
2861 Female, age 67, both hemispheres 7.5
2620 Female, age 94, left hemisphere 6.7
Parahippocampal cortex
nTPM: 9.2
2692 Male, age 74, both hemispheres 11.3
2532 Female, age 72, left hemisphere 11.2
1990 Female, age 91, right hemisphere 10.1
1933 Female, age 85, both hemispheres 9.6
2018 Male, age 76, both hemispheres 9.6
1850 Male, age 80, both hemispheres 9.3
2693 Female, age 94, both hemispheres 8.6
2245 Female, age 91, both hemispheres 8.3
2250 Female, age 67, right hemisphere 7.6
2622 Female, age 67, right hemisphere 6.5
Perirhinal gyrus
nTPM: 7.8
2521 Female, age 94, right hemisphere 8.6
1841 Female, age 85, right hemisphere 8.0
2848 Male, age 76, right hemisphere 8.0
1794 Male, age 80, right hemisphere 7.8
1847 Female, age 91, left hemisphere 6.8
Subiculum
nTPM: 12.4
2042 Male, age 76, both hemispheres 16.2
1901 Male, age 80, both hemispheres 14.1
1977 Female, age 85, both hemispheres 12.4
2438 Female, age 94, left hemisphere 11.3
2729 Female, age 91, right hemisphere 10.5
2619 Male, age 74, both hemispheres 9.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.9
Samples: 197

Max nTPM: 32.0
Min nTPM: 3.2
Std nTPM: 5.5
Median nTPM: 10.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 32.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 30.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 27.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 25.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 24.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 24.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 23.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 23.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 22.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 22.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 22.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.1
FF:10153-102I9 76 years, female 25.3
FF:10169-103B7 60 years, female 20.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.7
Samples: 4

Max nTPM: 20.1
Min nTPM: 12.7
Sample A Female 20.1
Sample B Female 14.3
Sample C Male 19.5
Sample D Male 12.7
Entorhinal cortex
nTPM: 12.9
Samples: 4

Max nTPM: 15.6
Min nTPM: 10.8
Sample A Female 10.8
Sample B Female 15.6
Sample C Male 14.0
Sample D Male 11.0
Subiculum
nTPM: 12.2
Samples: 4

Max nTPM: 14.1
Min nTPM: 9.9
Sample A Female 14.1
Sample B Female 12.9
Sample C Male 9.9
Sample D Male 12.0
Ventral hippocampus
nTPM: 13.8
Samples: 4

Max nTPM: 16.1
Min nTPM: 12.1
Sample A Female 16.1
Sample B Female 12.7
Sample C Male 12.1
Sample D Male 14.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.3
Samples: 4

Max nTPM: 8.8
Min nTPM: 7.6
Sample A Male 8.8
Sample B Male 8.6
Sample C Female 8.2
Sample D Female 7.6
Hippocampal formation
nTPM: 8.3
Samples: 4

Max nTPM: 9.0
Min nTPM: 7.6
Sample A Male 9.0
Sample B Male 7.9
Sample C Female 8.6
Sample D Female 7.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
70474041 Antisense, RP_050614_04_G07, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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