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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:101.2 nTPM
HPA:101.2 nTPM
GTEx:132.5 nTPM
FANTOM5:87.2 Scaled Tags Per Million
Pig:72.0 nTPM
Mouse:163.3 nTPM
Allen mouse:9.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004059Antibody HPA004186
Glial cells LowLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 101.2
Sample id Sample description nTPM
Hippocampus
nTPM: 97.9
2621 Female, age 67, right hemisphere 137.9
2529 Female, age 94, left hemisphere 118.5
1911 Female, age 85, right hemisphere 105.4
2148 Female, age 91, left hemisphere 87.3
1855 Male, age 76, left hemisphere 70.3
1898 Male, age 80, left hemisphere 68.2
Dentate gyrus
nTPM: 79.7
2531 Female, age 67, both hemispheres 111.0
1927 Female, age 91, both hemispheres 95.4
2530 Female, age 94, left hemisphere 75.6
2246 Female, age 85, both hemispheres 66.3
2528 Male, age 74, both hemispheres 66.0
2010 Male, age 76, both hemispheres 63.9
Entorhinal gyrus
nTPM: 76.2
2613 Female, age 94, left hemisphere 98.1
2764 Male, age 80, right hemisphere 76.6
1787 Male, age 76, left hemisphere 75.8
1938 Female, age 85, left hemisphere 72.6
2686 Male, age 75, right hemisphere 69.5
2117 Female, age 91, right hemisphere 64.8
Hippocampus, CA1
nTPM: 87.6
2749 Male, age 80, left hemisphere 136.2
2527 Male, age 74, both hemispheres 99.7
2082 Female, age 91, right hemisphere 71.4
1873 Female, age 85, both hemispheres 71.1
2045 Male, age 76, both hemispheres 59.5
Hippocampus, CA2
nTPM: 79.7
1963 Male, age 80, left hemisphere 108.1
2113 Female, age 91, right hemisphere 84.8
2437 Female, age 94, left hemisphere 74.0
1892 Male, age 76, both hemispheres 71.0
1940 Female, age 85, left hemisphere 70.8
2249 Male, age 74, both hemispheres 69.5
Hippocampus, CA3
nTPM: 101.2
2137 Male, age 80, left hemisphere 162.2
2861 Female, age 67, both hemispheres 121.1
2620 Female, age 94, left hemisphere 107.5
1867 Male, age 76, both hemispheres 77.0
2436 Male, age 74, both hemispheres 70.4
1891 Female, age 85, both hemispheres 69.2
Parahippocampal cortex
nTPM: 72.9
2245 Female, age 91, both hemispheres 114.8
2622 Female, age 67, right hemisphere 80.4
2250 Female, age 67, right hemisphere 74.0
1933 Female, age 85, both hemispheres 71.0
2018 Male, age 76, both hemispheres 69.8
2532 Female, age 72, left hemisphere 69.2
2692 Male, age 74, both hemispheres 65.7
1850 Male, age 80, both hemispheres 63.0
1990 Female, age 91, right hemisphere 62.3
2693 Female, age 94, both hemispheres 58.8
Perirhinal gyrus
nTPM: 72.1
2521 Female, age 94, right hemisphere 92.0
1847 Female, age 91, left hemisphere 75.0
1794 Male, age 80, right hemisphere 71.8
1841 Female, age 85, right hemisphere 62.7
2848 Male, age 76, right hemisphere 58.8
Subiculum
nTPM: 71.4
1901 Male, age 80, both hemispheres 87.9
2042 Male, age 76, both hemispheres 87.4
2619 Male, age 74, both hemispheres 66.7
2438 Female, age 94, left hemisphere 65.8
1977 Female, age 85, both hemispheres 63.6
2729 Female, age 91, right hemisphere 56.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 132.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 132.5
Samples: 197

Max nTPM: 734.9
Min nTPM: 29.3
Std nTPM: 82.4
Median nTPM: 112.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 734.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 423.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 401.2
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 357.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 351.9
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 346.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 323.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 310.4
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 285.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 281.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 273.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 87.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 87.2
FF:10153-102I9 76 years, female 110.6
FF:10169-103B7 60 years, female 63.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 72.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 69.1
Samples: 4

Max nTPM: 81.1
Min nTPM: 51.0
Sample A Female 81.1
Sample B Female 67.7
Sample C Male 76.6
Sample D Male 51.0
Entorhinal cortex
nTPM: 72.0
Samples: 4

Max nTPM: 89.0
Min nTPM: 59.2
Sample A Female 76.0
Sample B Female 59.2
Sample C Male 89.0
Sample D Male 63.9
Subiculum
nTPM: 65.7
Samples: 4

Max nTPM: 87.5
Min nTPM: 57.6
Sample A Female 87.5
Sample B Female 57.6
Sample C Male 60.1
Sample D Male 57.6
Ventral hippocampus
nTPM: 64.7
Samples: 4

Max nTPM: 104.7
Min nTPM: 41.0
Sample A Female 43.7
Sample B Female 41.0
Sample C Male 69.4
Sample D Male 104.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 163.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 152.7
Samples: 4

Max nTPM: 163.7
Min nTPM: 143.9
Sample A Male 163.7
Sample B Male 158.1
Sample C Female 143.9
Sample D Female 144.9
Hippocampal formation
nTPM: 163.3
Samples: 4

Max nTPM: 170.3
Min nTPM: 154.0
Sample A Male 158.7
Sample B Male 170.2
Sample C Female 170.3
Sample D Female 154.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.9
69672880 Antisense, RP_050428_04_F12, Mouse strain C57BL/6J (56 days, male) 9.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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