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FBXL20
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:8.8 nTPM
HPA:8.8 nTPM
GTEx:4.3 nTPM
FANTOM5:34.1 Scaled Tags Per Million
Pig:26.4 nTPM
Mouse:10.7 nTPM
Allen mouse:2.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044748Antibody HPA050397
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 8.8
Sample id Sample description nTPM
Hippocampus
nTPM: 4.3
2621 Female, age 67, right hemisphere 7.2
1898 Male, age 80, left hemisphere 6.8
2148 Female, age 91, left hemisphere 6.2
1855 Male, age 76, left hemisphere 3.3
1911 Female, age 85, right hemisphere 2.4
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 7.0
1927 Female, age 91, both hemispheres 11.2
2528 Male, age 74, both hemispheres 9.2
2531 Female, age 67, both hemispheres 7.3
2010 Male, age 76, both hemispheres 5.8
2530 Female, age 94, left hemisphere 4.9
2246 Female, age 85, both hemispheres 3.6
Entorhinal gyrus
nTPM: 5.4
2613 Female, age 94, left hemisphere 9.2
2764 Male, age 80, right hemisphere 8.2
1938 Female, age 85, left hemisphere 7.8
1787 Male, age 76, left hemisphere 7.0
2117 Female, age 91, right hemisphere 0.0
2686 Male, age 75, right hemisphere 0.0
Hippocampus, CA1
nTPM: 6.2
2045 Male, age 76, both hemispheres 10.4
2749 Male, age 80, left hemisphere 9.1
1873 Female, age 85, both hemispheres 5.9
2082 Female, age 91, right hemisphere 3.5
2527 Male, age 74, both hemispheres 2.1
Hippocampus, CA2
nTPM: 4.8
1963 Male, age 80, left hemisphere 12.5
1892 Male, age 76, both hemispheres 9.4
2437 Female, age 94, left hemisphere 3.5
1940 Female, age 85, left hemisphere 3.4
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 7.2
2861 Female, age 67, both hemispheres 15.0
2620 Female, age 94, left hemisphere 12.1
2137 Male, age 80, left hemisphere 9.5
1867 Male, age 76, both hemispheres 6.7
1891 Female, age 85, both hemispheres 0.3
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 6.1
1933 Female, age 85, both hemispheres 9.5
2622 Female, age 67, right hemisphere 9.0
1850 Male, age 80, both hemispheres 8.1
2693 Female, age 94, both hemispheres 7.3
1990 Female, age 91, right hemisphere 6.8
2250 Female, age 67, right hemisphere 5.8
2692 Male, age 74, both hemispheres 4.8
2532 Female, age 72, left hemisphere 4.1
2245 Female, age 91, both hemispheres 3.3
2018 Male, age 76, both hemispheres 1.9
Perirhinal gyrus
nTPM: 8.8
2848 Male, age 76, right hemisphere 10.7
2521 Female, age 94, right hemisphere 9.5
1847 Female, age 91, left hemisphere 8.9
1841 Female, age 85, right hemisphere 7.8
1794 Male, age 80, right hemisphere 7.0
Subiculum
nTPM: 3.2
1977 Female, age 85, both hemispheres 8.5
2619 Male, age 74, both hemispheres 5.1
1901 Male, age 80, both hemispheres 3.1
2729 Female, age 91, right hemisphere 1.8
2042 Male, age 76, both hemispheres 0.9
2438 Female, age 94, left hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 4.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.3
Samples: 197

Max nTPM: 6.7
Min nTPM: 1.6
Std nTPM: 0.8
Median nTPM: 4.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 6.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 6.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 6.2
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 6.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 5.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 5.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 5.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 5.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 5.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 5.8
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 5.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.1
FF:10153-102I9 76 years, female 43.2
FF:10169-103B7 60 years, female 25.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.5
Samples: 4

Max nTPM: 25.9
Min nTPM: 20.7
Sample A Female 20.7
Sample B Female 23.9
Sample C Male 25.9
Sample D Male 23.4
Entorhinal cortex
nTPM: 26.2
Samples: 4

Max nTPM: 27.8
Min nTPM: 24.2
Sample A Female 25.9
Sample B Female 24.2
Sample C Male 26.7
Sample D Male 27.8
Subiculum
nTPM: 26.4
Samples: 4

Max nTPM: 27.2
Min nTPM: 26.0
Sample A Female 27.2
Sample B Female 26.0
Sample C Male 26.4
Sample D Male 26.1
Ventral hippocampus
nTPM: 23.8
Samples: 4

Max nTPM: 26.6
Min nTPM: 21.6
Sample A Female 21.6
Sample B Female 21.9
Sample C Male 26.6
Sample D Male 25.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.7
Samples: 4

Max nTPM: 11.7
Min nTPM: 10.0
Sample A Male 10.5
Sample B Male 10.4
Sample C Female 10.0
Sample D Female 11.7
Hippocampal formation
nTPM: 10.7
Samples: 4

Max nTPM: 11.6
Min nTPM: 9.6
Sample A Male 9.6
Sample B Male 11.6
Sample C Female 11.5
Sample D Female 9.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.5
69080010 Antisense, RP_050324_01_C10, Mouse strain C57BL/6J (56 days, male) 4.8
70276813 Antisense, RP_050531_01_B09, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.