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RUNDC3A
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:106.4 nTPM
HPA:106.4 nTPM
GTEx:107.6 nTPM
FANTOM5:11.6 Scaled Tags Per Million
Pig:124.7 nTPM
Mouse:119.9 nTPM
Allen mouse:5.1 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 106.4
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 88.5
2586 Male, age 75, left hemisphere 106.1
2219 Male, age 76, both hemispheres 104.6
2666 Male, age 74, left hemisphere 93.4
1827 Male, age 72, unknown 91.4
2019 Male, age 18, unknown 88.1
2828 Female, age 72, unknown 85.9
2411 Female, age 72, unknown 85.8
1833 Male, age 53, unknown 78.7
1870 Female, age 42, unknown 76.2
1830 Male, age 51, unknown 75.0
Dorsal raphe nucleus
nTPM: 82.0
2298 Female, age 72, unknown 87.5
2750 Male, age 76, both hemispheres 86.4
2047 Male, age 72, unknown 82.9
1828 Male, age 53, unknown 82.4
2016 Female, age 72, unknown 70.7
Inferior colliculus
nTPM: 82.9
2097 Female, age 72, unknown 90.3
1890 Male, age 53, unknown 83.5
1848 Female, age 42, unknown 80.9
2849 Male, age 72, unknown 76.8
Median raphe nucleus
nTPM: 90.9
2220 Male, age 76, midline 90.9
Pedunculopontine tegmental nucleus
nTPM: 83.2
1921 Female, age 85, both hemispheres 89.1
2334 Male, age 80, both hemispheres 89.0
2338 Male, age 61, both hemispheres 71.5
Periaquaductal grey, anterior
nTPM: 91.3
1795 Male, age 51, unknown 99.2
2502 Female, age 75, unknown 89.0
1947 Male, age 18, unknown 85.7
Periaquaductal grey, dorsal
nTPM: 76.5
1840 Male, age 53, unknown 82.6
1831 Male, age 72, unknown 77.4
2464 Female, age 72, unknown 77.4
2850 Male, age 76, both hemispheres 68.7
Periaquaductal grey, lateral
nTPM: 69.2
2053 Male, age 18, unknown 74.0
2140 Male, age 76, both hemispheres 69.6
2272 Male, age 74, both hemispheres 63.8
Pretectal area
nTPM: 91.1
1816 Male, age 51, unknown 117.9
1944 Female, age 72, unknown 113.5
2007 Male, age 72, unknown 111.1
1817 Female, age 42, unknown 110.3
1815 Male, age 53, unknown 100.9
2667 Female, age 75, unknown 86.1
2224 Female, age 72, unknown 79.9
2825 Male, age 18, unknown 76.5
2407 Male, age 75, both hemispheres 74.5
2316 Male, age 76, right hemisphere 68.4
2273 Male, age 74, both hemispheres 63.1
Red nucleus
nTPM: 77.2
2785 Male, age 18, unknown 90.4
2584 Male, age 75, left hemisphere 86.8
2503 Female, age 72, unknown 81.2
2588 Male, age 74, left hemisphere 79.0
1821 Female, age 72, unknown 78.2
2769 Male, age 72, unknown 77.8
2227 Male, age 72, unknown 77.7
1954 Female, age 42, unknown 76.6
1904 Male, age 53, unknown 73.2
1865 Male, age 51, unknown 73.0
2823 Male, age 76, right hemisphere 66.9
2725 Female, age 75, unknown 65.3
Substantia nigra
nTPM: 106.4
2665 Male, age 74, both hemispheres 139.7
1916 Female, age 42, unknown 135.0
1851 Male, age 51, unknown 115.3
1889 Female, age 72, unknown 104.8
1941 Male, age 53, unknown 104.1
2409 Female, age 72, unknown 99.8
2241 Male, age 72, unknown 98.7
2583 Male, age 75, right hemisphere 95.3
2699 Male, age 18, unknown 91.0
2590 Female, age 75, unknown 80.5
Superior colliculus
nTPM: 92.3
2668 Female, age 75, unknown 159.2
2087 Female, age 72, unknown 108.0
1796 Male, age 53, unknown 100.0
2261 Male, age 18, unknown 92.0
2664 Male, age 75, both hemispheres 85.3
1895 Male, age 76, right hemisphere 80.5
1913 Female, age 42, unknown 78.3
1839 Male, age 51, unknown 77.7
1995 Male, age 72, unknown 72.4
2587 Male, age 74, left hemisphere 70.1
Ventral tegmental area
nTPM: 99.1
2410 Female, age 72, unknown 116.6
2218 Male, age 76, both hemispheres 115.6
1915 Female, age 42, unknown 101.4
2223 Female, age 72, unknown 93.1
1942 Male, age 51, unknown 88.9
2021 Male, age 53, unknown 78.7

MIDBRAIN - GTEx RNA-seqi
Average nTPM 107.6
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 107.6
Samples: 139

Max nTPM: 331.5
Min nTPM: 25.5
Std nTPM: 63.5
Median nTPM: 91.6
GTEX-13O3Q-0011-R2b-SM-5KM3K 50-59 years, male 331.5
GTEX-1313W-0011-R2a-SM-5EGLF 50-59 years, female 287.0
GTEX-Z93S-0011-R2a-SM-4RGNG 50-59 years, male 258.7
GTEX-1B8L1-0011-R2a-SM-9OSVL 60-69 years, male 252.8
GTEX-1399T-0011-R2b-SM-5DUXM 60-69 years, male 252.0
GTEX-15ER7-0011-R2a-SM-6M46O 20-29 years, female 230.2
GTEX-1EMGI-0011-R2b-SM-9OSVS 60-69 years, male 228.5
GTEX-12ZZX-0011-R2a-SM-5EGLG 40-49 years, female 227.3
GTEX-13OW6-0011-R2a-SM-5L3HG 50-59 years, male 221.5
GTEX-15DYW-0011-R2b-SM-7KUKY 60-69 years, female 217.6
GTEX-1B933-0011-R2b-SM-7IGNM 50-59 years, female 213.7
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 11.6
FF:10158-103A5 76 years, female 11.6

MIDBRAIN - Pig RNA-seqi
Average nTPM 124.7
Pig sample Sample description nTPM
Midbrain
nTPM: 110.5
Samples: 4

Max nTPM: 175.7
Min nTPM: 47.3
Sample A Female 47.3
Sample B Female 79.9
Sample C Male 175.7
Sample D Male 138.9
Periaqueductal gray
nTPM: 67.5
Samples: 3

Max nTPM: 83.2
Min nTPM: 50.9
Sample B Female 68.4
Sample C Male 83.2
Sample D Male 50.9
Substantia nigra
nTPM: 82.2
Samples: 4

Max nTPM: 118.4
Min nTPM: 48.4
Sample A Female 118.4
Sample B Female 59.3
Sample C Male 102.8
Sample D Male 48.4
Superior colliculi
nTPM: 124.7
Samples: 4

Max nTPM: 167.1
Min nTPM: 84.3
Sample A Female 135.0
Sample B Female 84.3
Sample C Male 167.1
Sample D Male 112.5

MIDBRAIN - Mouse RNA-seqi
Average nTPM 119.9
Mouse sample Sample description nTPM
Midbrain
nTPM: 119.9
Samples: 4

Max nTPM: 132.1
Min nTPM: 111.6
Sample A Male 132.1
Sample B Male 116.7
Sample C Female 111.6
Sample D Female 119.2

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 5.1
68745366 Antisense, RP_050210_01_G09, Mouse strain C57BL/6J (56 days, male) 5.1

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The Human Protein Atlas

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