ABOUTMENU
HELP
NEWS
CDK5RAP3
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:85.5 nTPM
HPA:85.5 nTPM
GTEx:45.9 nTPM
FANTOM5:39.0 Scaled Tags Per Million
Pig:13.9 nTPM
Mouse:25.1 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022141Antibody HPA022882Antibody HPA027883
Glial cells MediumNot detectedMedium
Neuronal cells MediumMediumHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 85.5
Sample id Sample description nTPM
Hippocampus
nTPM: 83.6
2529 Female, age 94, left hemisphere 86.3
2148 Female, age 91, left hemisphere 84.7
1898 Male, age 80, left hemisphere 84.2
1911 Female, age 85, right hemisphere 83.9
2621 Female, age 67, right hemisphere 82.0
1855 Male, age 76, left hemisphere 80.3
Dentate gyrus
nTPM: 83.3
1927 Female, age 91, both hemispheres 85.1
2528 Male, age 74, both hemispheres 84.0
2531 Female, age 67, both hemispheres 83.8
2010 Male, age 76, both hemispheres 83.2
2246 Female, age 85, both hemispheres 82.5
2530 Female, age 94, left hemisphere 80.9
Entorhinal gyrus
nTPM: 85.5
2117 Female, age 91, right hemisphere 87.1
2613 Female, age 94, left hemisphere 86.2
1787 Male, age 76, left hemisphere 86.0
2764 Male, age 80, right hemisphere 86.0
2686 Male, age 75, right hemisphere 84.5
1938 Female, age 85, left hemisphere 83.4
Hippocampus, CA1
nTPM: 84.0
2045 Male, age 76, both hemispheres 85.7
2082 Female, age 91, right hemisphere 84.6
2749 Male, age 80, left hemisphere 84.3
1873 Female, age 85, both hemispheres 83.6
2527 Male, age 74, both hemispheres 82.0
Hippocampus, CA2
nTPM: 83.7
2249 Male, age 74, both hemispheres 85.8
1892 Male, age 76, both hemispheres 85.2
1963 Male, age 80, left hemisphere 83.7
1940 Female, age 85, left hemisphere 82.7
2437 Female, age 94, left hemisphere 82.6
2113 Female, age 91, right hemisphere 82.4
Hippocampus, CA3
nTPM: 85.2
2436 Male, age 74, both hemispheres 89.5
1867 Male, age 76, both hemispheres 86.4
2620 Female, age 94, left hemisphere 86.0
2137 Male, age 80, left hemisphere 84.5
2861 Female, age 67, both hemispheres 83.1
1891 Female, age 85, both hemispheres 81.7
Parahippocampal cortex
nTPM: 82.1
1990 Female, age 91, right hemisphere 83.9
2532 Female, age 72, left hemisphere 83.2
2018 Male, age 76, both hemispheres 83.0
2250 Female, age 67, right hemisphere 82.5
1933 Female, age 85, both hemispheres 82.4
2622 Female, age 67, right hemisphere 81.9
1850 Male, age 80, both hemispheres 81.8
2245 Female, age 91, both hemispheres 81.6
2692 Male, age 74, both hemispheres 81.5
2693 Female, age 94, both hemispheres 79.2
Perirhinal gyrus
nTPM: 82.2
1794 Male, age 80, right hemisphere 83.8
2848 Male, age 76, right hemisphere 82.8
1841 Female, age 85, right hemisphere 81.9
2521 Female, age 94, right hemisphere 81.4
1847 Female, age 91, left hemisphere 81.1
Subiculum
nTPM: 82.6
2729 Female, age 91, right hemisphere 84.1
2042 Male, age 76, both hemispheres 83.4
2619 Male, age 74, both hemispheres 83.4
1977 Female, age 85, both hemispheres 83.0
2438 Female, age 94, left hemisphere 81.6
1901 Male, age 80, both hemispheres 80.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.9
Samples: 197

Max nTPM: 100.0
Min nTPM: 23.2
Std nTPM: 12.5
Median nTPM: 43.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 100.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 86.3
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 86.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 84.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 81.8
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 80.6
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 75.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 74.8
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 72.5
GTEX-14PJM-0011-R1a-SM-CNPO3 50-59 years, female 70.5
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 66.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.0
FF:10169-103B7 60 years, female 39.7
FF:10153-102I9 76 years, female 38.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.9
Samples: 4

Max nTPM: 21.2
Min nTPM: 7.1
Sample A Female 21.2
Sample B Female 14.2
Sample C Male 13.2
Sample D Male 7.1
Entorhinal cortex
nTPM: 9.6
Samples: 4

Max nTPM: 13.0
Min nTPM: 5.6
Sample A Female 10.7
Sample B Female 13.0
Sample C Male 9.1
Sample D Male 5.6
Subiculum
nTPM: 10.4
Samples: 4

Max nTPM: 14.2
Min nTPM: 6.8
Sample A Female 14.2
Sample B Female 10.8
Sample C Male 9.6
Sample D Male 6.8
Ventral hippocampus
nTPM: 13.2
Samples: 4

Max nTPM: 15.7
Min nTPM: 10.9
Sample A Female 15.7
Sample B Female 10.9
Sample C Male 14.6
Sample D Male 11.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.2
Samples: 4

Max nTPM: 27.3
Min nTPM: 22.7
Sample A Male 23.8
Sample B Male 22.7
Sample C Female 27.3
Sample D Female 22.8
Hippocampal formation
nTPM: 25.1
Samples: 4

Max nTPM: 28.5
Min nTPM: 22.0
Sample A Male 28.5
Sample B Male 22.0
Sample C Female 23.3
Sample D Female 26.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
69080011 Antisense, RP_050324_01_C11, Mouse strain C57BL/6J (56 days, male) 4.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.