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PFN1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:281.8 nTPM
HPA:281.8 nTPM
GTEx:173.0 nTPM
FANTOM5:196.0 Scaled Tags Per Million
Pig:77.8 nTPM
Mouse:238.0 nTPM
Allen mouse:8.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB037134Antibody CAB037140
Glial cells LowLow
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 281.8
Sample id Sample description nTPM
Hippocampus
nTPM: 281.8
1898 Male, age 80, left hemisphere 291.0
2621 Female, age 67, right hemisphere 288.1
2529 Female, age 94, left hemisphere 285.0
1855 Male, age 76, left hemisphere 282.8
1911 Female, age 85, right hemisphere 279.2
2148 Female, age 91, left hemisphere 264.8
Dentate gyrus
nTPM: 275.9
2530 Female, age 94, left hemisphere 307.2
2010 Male, age 76, both hemispheres 299.0
1927 Female, age 91, both hemispheres 268.7
2246 Female, age 85, both hemispheres 267.5
2528 Male, age 74, both hemispheres 262.9
2531 Female, age 67, both hemispheres 250.3
Entorhinal gyrus
nTPM: 261.9
2117 Female, age 91, right hemisphere 283.4
1938 Female, age 85, left hemisphere 264.3
1787 Male, age 76, left hemisphere 262.4
2764 Male, age 80, right hemisphere 260.9
2613 Female, age 94, left hemisphere 252.7
2686 Male, age 75, right hemisphere 247.6
Hippocampus, CA1
nTPM: 272.5
2749 Male, age 80, left hemisphere 302.3
2045 Male, age 76, both hemispheres 271.5
1873 Female, age 85, both hemispheres 270.1
2527 Male, age 74, both hemispheres 266.6
2082 Female, age 91, right hemisphere 252.3
Hippocampus, CA2
nTPM: 275.3
1892 Male, age 76, both hemispheres 286.1
1963 Male, age 80, left hemisphere 281.3
2249 Male, age 74, both hemispheres 279.5
1940 Female, age 85, left hemisphere 278.0
2437 Female, age 94, left hemisphere 271.7
2113 Female, age 91, right hemisphere 255.5
Hippocampus, CA3
nTPM: 268.2
2137 Male, age 80, left hemisphere 284.1
1867 Male, age 76, both hemispheres 283.9
2436 Male, age 74, both hemispheres 272.4
1891 Female, age 85, both hemispheres 262.4
2620 Female, age 94, left hemisphere 255.0
2861 Female, age 67, both hemispheres 251.5
Parahippocampal cortex
nTPM: 261.6
2250 Female, age 67, right hemisphere 279.5
2245 Female, age 91, both hemispheres 279.2
2018 Male, age 76, both hemispheres 275.8
2532 Female, age 72, left hemisphere 267.6
2692 Male, age 74, both hemispheres 260.5
1933 Female, age 85, both hemispheres 259.0
1990 Female, age 91, right hemisphere 257.8
1850 Male, age 80, both hemispheres 250.4
2622 Female, age 67, right hemisphere 244.6
2693 Female, age 94, both hemispheres 242.0
Perirhinal gyrus
nTPM: 253.9
1794 Male, age 80, right hemisphere 256.6
1847 Female, age 91, left hemisphere 255.3
2521 Female, age 94, right hemisphere 253.1
1841 Female, age 85, right hemisphere 252.5
2848 Male, age 76, right hemisphere 251.9
Subiculum
nTPM: 275.9
2042 Male, age 76, both hemispheres 316.2
1901 Male, age 80, both hemispheres 282.9
2619 Male, age 74, both hemispheres 273.2
2438 Female, age 94, left hemisphere 263.5
1977 Female, age 85, both hemispheres 260.4
2729 Female, age 91, right hemisphere 259.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 173.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 173.0
Samples: 197

Max nTPM: 526.7
Min nTPM: 95.9
Std nTPM: 55.1
Median nTPM: 162.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 526.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 430.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 367.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 364.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 346.8
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 301.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 298.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 291.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 268.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 253.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 251.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 196.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 196.0
FF:10153-102I9 76 years, female 221.6
FF:10169-103B7 60 years, female 170.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 77.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 77.8
Samples: 4

Max nTPM: 105.4
Min nTPM: 57.6
Sample A Female 105.4
Sample B Female 64.1
Sample C Male 83.9
Sample D Male 57.6
Entorhinal cortex
nTPM: 60.1
Samples: 4

Max nTPM: 70.2
Min nTPM: 51.4
Sample A Female 70.2
Sample B Female 57.0
Sample C Male 61.9
Sample D Male 51.4
Subiculum
nTPM: 62.5
Samples: 4

Max nTPM: 78.9
Min nTPM: 54.7
Sample A Female 78.9
Sample B Female 54.7
Sample C Male 56.9
Sample D Male 59.6
Ventral hippocampus
nTPM: 70.9
Samples: 4

Max nTPM: 86.4
Min nTPM: 47.5
Sample A Female 72.8
Sample B Female 47.5
Sample C Male 86.4
Sample D Male 76.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 238.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 142.5
Samples: 4

Max nTPM: 157.5
Min nTPM: 129.7
Sample A Male 136.2
Sample B Male 129.7
Sample C Female 157.5
Sample D Female 146.4
Hippocampal formation
nTPM: 238.0
Samples: 4

Max nTPM: 284.8
Min nTPM: 217.1
Sample A Male 225.1
Sample B Male 217.1
Sample C Female 284.8
Sample D Female 224.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.9
73514809 Antisense, RP_051121_03_B08, Mouse strain C57BL/6J (56 days, male) 8.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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