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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:14.9 nTPM
HPA:14.9 nTPM
GTEx:14.7 nTPM
FANTOM5:15.4 Scaled Tags Per Million
Pig:25.9 nTPM
Mouse:60.3 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007716
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.9
Sample id Sample description nTPM
Hippocampus
nTPM: 14.3
1898 Male, age 80, left hemisphere 15.5
1855 Male, age 76, left hemisphere 15.0
2529 Female, age 94, left hemisphere 14.4
1911 Female, age 85, right hemisphere 14.0
2621 Female, age 67, right hemisphere 13.9
2148 Female, age 91, left hemisphere 12.8
Dentate gyrus
nTPM: 14.2
2530 Female, age 94, left hemisphere 15.5
2010 Male, age 76, both hemispheres 15.3
2528 Male, age 74, both hemispheres 14.4
1927 Female, age 91, both hemispheres 13.9
2246 Female, age 85, both hemispheres 13.5
2531 Female, age 67, both hemispheres 12.6
Entorhinal gyrus
nTPM: 14.2
2764 Male, age 80, right hemisphere 14.8
1938 Female, age 85, left hemisphere 14.5
2613 Female, age 94, left hemisphere 14.5
1787 Male, age 76, left hemisphere 14.3
2117 Female, age 91, right hemisphere 14.2
2686 Male, age 75, right hemisphere 12.7
Hippocampus, CA1
nTPM: 14.9
2749 Male, age 80, left hemisphere 17.4
2527 Male, age 74, both hemispheres 15.0
1873 Female, age 85, both hemispheres 14.8
2045 Male, age 76, both hemispheres 13.8
2082 Female, age 91, right hemisphere 13.8
Hippocampus, CA2
nTPM: 14.8
1892 Male, age 76, both hemispheres 15.7
2249 Male, age 74, both hemispheres 15.5
1963 Male, age 80, left hemisphere 15.1
1940 Female, age 85, left hemisphere 14.7
2113 Female, age 91, right hemisphere 14.1
2437 Female, age 94, left hemisphere 14.0
Hippocampus, CA3
nTPM: 14.0
2137 Male, age 80, left hemisphere 15.8
2436 Male, age 74, both hemispheres 14.7
1867 Male, age 76, both hemispheres 14.4
1891 Female, age 85, both hemispheres 14.0
2620 Female, age 94, left hemisphere 13.2
2861 Female, age 67, both hemispheres 11.9
Parahippocampal cortex
nTPM: 13.6
1933 Female, age 85, both hemispheres 14.4
1990 Female, age 91, right hemisphere 14.3
2018 Male, age 76, both hemispheres 14.3
2250 Female, age 67, right hemisphere 14.2
1850 Male, age 80, both hemispheres 14.1
2245 Female, age 91, both hemispheres 13.7
2692 Male, age 74, both hemispheres 13.2
2693 Female, age 94, both hemispheres 13.1
2532 Female, age 72, left hemisphere 12.6
2622 Female, age 67, right hemisphere 12.1
Perirhinal gyrus
nTPM: 14.7
1794 Male, age 80, right hemisphere 15.4
1847 Female, age 91, left hemisphere 15.4
2521 Female, age 94, right hemisphere 15.0
1841 Female, age 85, right hemisphere 14.4
2848 Male, age 76, right hemisphere 13.4
Subiculum
nTPM: 13.7
1901 Male, age 80, both hemispheres 14.9
2042 Male, age 76, both hemispheres 14.3
1977 Female, age 85, both hemispheres 14.1
2619 Male, age 74, both hemispheres 13.6
2729 Female, age 91, right hemisphere 12.9
2438 Female, age 94, left hemisphere 12.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.7
Samples: 197

Max nTPM: 25.6
Min nTPM: 7.1
Std nTPM: 3.2
Median nTPM: 14.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 25.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 25.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 24.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 23.4
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 22.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 22.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 22.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 21.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 21.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 20.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 20.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.4
FF:10153-102I9 76 years, female 17.2
FF:10169-103B7 60 years, female 13.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.9
Samples: 4

Max nTPM: 33.8
Min nTPM: 19.9
Sample A Female 33.8
Sample B Female 24.5
Sample C Male 25.3
Sample D Male 19.9
Entorhinal cortex
nTPM: 21.9
Samples: 4

Max nTPM: 24.6
Min nTPM: 20.0
Sample A Female 21.2
Sample B Female 21.8
Sample C Male 24.6
Sample D Male 20.0
Subiculum
nTPM: 21.6
Samples: 4

Max nTPM: 26.9
Min nTPM: 18.2
Sample A Female 26.9
Sample B Female 18.2
Sample C Male 21.3
Sample D Male 20.1
Ventral hippocampus
nTPM: 25.3
Samples: 4

Max nTPM: 32.2
Min nTPM: 15.3
Sample A Female 25.3
Sample B Female 15.3
Sample C Male 32.2
Sample D Male 28.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 60.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.3
Samples: 4

Max nTPM: 59.6
Min nTPM: 52.9
Sample A Male 52.9
Sample B Male 54.2
Sample C Female 58.6
Sample D Female 59.6
Hippocampal formation
nTPM: 60.3
Samples: 4

Max nTPM: 63.1
Min nTPM: 58.1
Sample A Male 61.3
Sample B Male 58.1
Sample C Female 63.1
Sample D Female 58.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
73606688 Antisense, RP_051130_01_E01, Mouse strain C57BL/6J (56 days, male) 2.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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