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B9D1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:20.7 nTPM
HPA:20.7 nTPM
GTEx:25.9 nTPM
FANTOM5:34.1 Scaled Tags Per Million
Pig:19.1 nTPM
Mouse:19.9 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022957
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.7
Sample id Sample description nTPM
Hippocampus
nTPM: 16.4
1911 Female, age 85, right hemisphere 17.8
2529 Female, age 94, left hemisphere 17.7
1855 Male, age 76, left hemisphere 16.9
2148 Female, age 91, left hemisphere 15.8
2621 Female, age 67, right hemisphere 15.5
1898 Male, age 80, left hemisphere 14.8
Dentate gyrus
nTPM: 19.1
2530 Female, age 94, left hemisphere 21.2
2531 Female, age 67, both hemispheres 21.0
2246 Female, age 85, both hemispheres 19.1
1927 Female, age 91, both hemispheres 18.3
2010 Male, age 76, both hemispheres 18.2
2528 Male, age 74, both hemispheres 16.7
Entorhinal gyrus
nTPM: 18.6
2686 Male, age 75, right hemisphere 24.4
2613 Female, age 94, left hemisphere 20.1
1787 Male, age 76, left hemisphere 18.0
2764 Male, age 80, right hemisphere 17.6
1938 Female, age 85, left hemisphere 16.6
2117 Female, age 91, right hemisphere 14.7
Hippocampus, CA1
nTPM: 18.8
2082 Female, age 91, right hemisphere 22.7
2045 Male, age 76, both hemispheres 19.0
2749 Male, age 80, left hemisphere 18.7
1873 Female, age 85, both hemispheres 17.3
2527 Male, age 74, both hemispheres 16.2
Hippocampus, CA2
nTPM: 18.0
1940 Female, age 85, left hemisphere 21.3
2437 Female, age 94, left hemisphere 19.3
2249 Male, age 74, both hemispheres 18.2
2113 Female, age 91, right hemisphere 18.0
1892 Male, age 76, both hemispheres 17.2
1963 Male, age 80, left hemisphere 13.8
Hippocampus, CA3
nTPM: 20.7
2620 Female, age 94, left hemisphere 27.6
2137 Male, age 80, left hemisphere 21.2
2436 Male, age 74, both hemispheres 20.9
2861 Female, age 67, both hemispheres 20.0
1867 Male, age 76, both hemispheres 17.9
1891 Female, age 85, both hemispheres 16.6
Parahippocampal cortex
nTPM: 17.3
2622 Female, age 67, right hemisphere 20.4
1933 Female, age 85, both hemispheres 19.1
2693 Female, age 94, both hemispheres 18.6
2018 Male, age 76, both hemispheres 17.8
2692 Male, age 74, both hemispheres 17.7
2532 Female, age 72, left hemisphere 16.8
1850 Male, age 80, both hemispheres 16.6
1990 Female, age 91, right hemisphere 15.9
2245 Female, age 91, both hemispheres 15.5
2250 Female, age 67, right hemisphere 14.4
Perirhinal gyrus
nTPM: 19.0
1841 Female, age 85, right hemisphere 20.7
1794 Male, age 80, right hemisphere 19.7
1847 Female, age 91, left hemisphere 18.9
2848 Male, age 76, right hemisphere 17.8
2521 Female, age 94, right hemisphere 17.7
Subiculum
nTPM: 15.9
1977 Female, age 85, both hemispheres 17.4
1901 Male, age 80, both hemispheres 16.8
2619 Male, age 74, both hemispheres 16.8
2729 Female, age 91, right hemisphere 15.8
2042 Male, age 76, both hemispheres 14.7
2438 Female, age 94, left hemisphere 14.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.9
Samples: 197

Max nTPM: 61.7
Min nTPM: 5.3
Std nTPM: 10.2
Median nTPM: 25.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 61.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 57.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 56.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 53.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 52.5
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 52.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 48.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 47.5
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 47.3
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 46.8
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 44.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.1
FF:10169-103B7 60 years, female 37.6
FF:10153-102I9 76 years, female 30.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.5
Samples: 4

Max nTPM: 19.7
Min nTPM: 12.6
Sample A Female 19.7
Sample B Female 19.1
Sample C Male 14.5
Sample D Male 12.6
Entorhinal cortex
nTPM: 15.0
Samples: 4

Max nTPM: 16.1
Min nTPM: 12.4
Sample A Female 15.6
Sample B Female 16.1
Sample C Male 15.8
Sample D Male 12.4
Subiculum
nTPM: 14.8
Samples: 4

Max nTPM: 18.2
Min nTPM: 11.6
Sample A Female 18.2
Sample B Female 15.0
Sample C Male 14.3
Sample D Male 11.6
Ventral hippocampus
nTPM: 19.1
Samples: 4

Max nTPM: 22.3
Min nTPM: 15.8
Sample A Female 17.5
Sample B Female 15.8
Sample C Male 22.3
Sample D Male 20.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.4
Samples: 4

Max nTPM: 22.9
Min nTPM: 16.8
Sample A Male 17.1
Sample B Male 20.8
Sample C Female 22.9
Sample D Female 16.8
Hippocampal formation
nTPM: 19.9
Samples: 4

Max nTPM: 24.8
Min nTPM: 14.7
Sample A Male 24.8
Sample B Male 17.7
Sample C Female 14.7
Sample D Female 22.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71991965 Antisense, RP_051012_03_H01, Mouse strain C57BL/6J (56 days, male) 0.1

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