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PSMD11
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:26.0 nTPM
HPA:26.0 nTPM
GTEx:21.7 nTPM
FANTOM5:51.1 Scaled Tags Per Million
Pig:35.5 nTPM
Mouse:50.3 nTPM
Allen mouse:10.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042275Antibody HPA067433
Glial cells Not detectedLow
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.0
Sample id Sample description nTPM
Hippocampus
nTPM: 24.7
1898 Male, age 80, left hemisphere 26.2
1911 Female, age 85, right hemisphere 25.5
1855 Male, age 76, left hemisphere 24.8
2148 Female, age 91, left hemisphere 24.1
2621 Female, age 67, right hemisphere 24.1
2529 Female, age 94, left hemisphere 23.7
Dentate gyrus
nTPM: 24.2
1927 Female, age 91, both hemispheres 25.2
2246 Female, age 85, both hemispheres 24.9
2530 Female, age 94, left hemisphere 24.6
2010 Male, age 76, both hemispheres 24.5
2528 Male, age 74, both hemispheres 23.4
2531 Female, age 67, both hemispheres 22.8
Entorhinal gyrus
nTPM: 24.6
1938 Female, age 85, left hemisphere 26.5
2764 Male, age 80, right hemisphere 25.7
2613 Female, age 94, left hemisphere 25.2
2117 Female, age 91, right hemisphere 24.0
1787 Male, age 76, left hemisphere 23.5
2686 Male, age 75, right hemisphere 22.7
Hippocampus, CA1
nTPM: 26.0
2749 Male, age 80, left hemisphere 32.6
2527 Male, age 74, both hemispheres 26.3
2045 Male, age 76, both hemispheres 24.1
1873 Female, age 85, both hemispheres 23.9
2082 Female, age 91, right hemisphere 23.3
Hippocampus, CA2
nTPM: 24.6
2249 Male, age 74, both hemispheres 26.6
1892 Male, age 76, both hemispheres 26.4
1963 Male, age 80, left hemisphere 26.2
2113 Female, age 91, right hemisphere 23.3
2437 Female, age 94, left hemisphere 22.6
1940 Female, age 85, left hemisphere 22.5
Hippocampus, CA3
nTPM: 25.8
2137 Male, age 80, left hemisphere 32.1
2620 Female, age 94, left hemisphere 27.2
1867 Male, age 76, both hemispheres 25.8
1891 Female, age 85, both hemispheres 25.4
2436 Male, age 74, both hemispheres 23.7
2861 Female, age 67, both hemispheres 20.6
Parahippocampal cortex
nTPM: 25.3
2692 Male, age 74, both hemispheres 27.4
1933 Female, age 85, both hemispheres 26.4
2693 Female, age 94, both hemispheres 26.1
2250 Female, age 67, right hemisphere 25.5
1850 Male, age 80, both hemispheres 25.4
1990 Female, age 91, right hemisphere 25.3
2245 Female, age 91, both hemispheres 25.1
2532 Female, age 72, left hemisphere 24.4
2018 Male, age 76, both hemispheres 24.1
2622 Female, age 67, right hemisphere 23.1
Perirhinal gyrus
nTPM: 25.5
1847 Female, age 91, left hemisphere 26.8
1841 Female, age 85, right hemisphere 26.2
1794 Male, age 80, right hemisphere 25.1
2521 Female, age 94, right hemisphere 24.9
2848 Male, age 76, right hemisphere 24.6
Subiculum
nTPM: 23.6
1901 Male, age 80, both hemispheres 26.2
1977 Female, age 85, both hemispheres 26.2
2042 Male, age 76, both hemispheres 24.0
2619 Male, age 74, both hemispheres 23.3
2438 Female, age 94, left hemisphere 21.0
2729 Female, age 91, right hemisphere 20.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.7
Samples: 197

Max nTPM: 35.7
Min nTPM: 15.4
Std nTPM: 3.4
Median nTPM: 21.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 35.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 34.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 30.6
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 30.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 29.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 28.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 28.8
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 28.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 28.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 28.0
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 27.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.1
FF:10169-103B7 60 years, female 56.5
FF:10153-102I9 76 years, female 45.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 35.5
Samples: 4

Max nTPM: 44.9
Min nTPM: 27.0
Sample A Female 44.9
Sample B Female 34.5
Sample C Male 35.5
Sample D Male 27.0
Entorhinal cortex
nTPM: 30.3
Samples: 4

Max nTPM: 32.4
Min nTPM: 28.0
Sample A Female 32.4
Sample B Female 30.3
Sample C Male 30.5
Sample D Male 28.0
Subiculum
nTPM: 30.6
Samples: 4

Max nTPM: 37.3
Min nTPM: 27.9
Sample A Female 37.3
Sample B Female 28.5
Sample C Male 28.6
Sample D Male 27.9
Ventral hippocampus
nTPM: 32.9
Samples: 4

Max nTPM: 38.3
Min nTPM: 23.6
Sample A Female 34.4
Sample B Female 23.6
Sample C Male 38.3
Sample D Male 35.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 50.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 49.5
Samples: 4

Max nTPM: 52.2
Min nTPM: 47.0
Sample A Male 47.0
Sample B Male 50.3
Sample C Female 48.5
Sample D Female 52.2
Hippocampal formation
nTPM: 50.3
Samples: 4

Max nTPM: 52.3
Min nTPM: 48.4
Sample A Male 52.3
Sample B Male 48.5
Sample C Female 51.8
Sample D Female 48.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.3
74743282 Antisense, RP_060220_04_E09, Mouse strain C57BL/6J (56 days, male) 12.2
69817426 Antisense, RP_050510_03_D03, Mouse strain C57BL/6J (56 days, male) 8.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.